Merge pull request #4 from AlexandrovLab/i3_fix

I3 fix
AlexandrovLab · Sep 29, 2023 · ced39a8 · ced39a8
2 parents 1ef3a90 + 358956d
commit ced39a8
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Showing 19 changed files with 9 additions and 6,548 deletions.
diff --git a/.gitignore b/.gitignore
@@ -3,6 +3,7 @@
 
 # Setuptools distribution folder.
 /dist/
+build/
 
 # Python egg metadata, regenerated from source files by setuptools.
 /*.egg-info

diff --git a/.travis.yml b/.travis.yml
@@ -2,7 +2,7 @@ dist: xenial
 language: python
 
 python:
-  - '3.7'
+  - '3.8'
 
 install:
   - pip install .

diff --git a/SigProfilerSimulator.egg-info/PKG-INFO b/SigProfilerSimulator.egg-info/PKG-INFO
diff --git a/SigProfilerSimulator.egg-info/SOURCES.txt b/SigProfilerSimulator.egg-info/SOURCES.txt
diff --git a/SigProfilerSimulator.egg-info/dependency_links.txt b/SigProfilerSimulator.egg-info/dependency_links.txt
diff --git a/SigProfilerSimulator.egg-info/not-zip-safe b/SigProfilerSimulator.egg-info/not-zip-safe
diff --git a/SigProfilerSimulator.egg-info/requires.txt b/SigProfilerSimulator.egg-info/requires.txt
diff --git a/SigProfilerSimulator.egg-info/top_level.txt b/SigProfilerSimulator.egg-info/top_level.txt
diff --git a/SigProfilerSimulator/SigProfilerSimulator.py b/SigProfilerSimulator/SigProfilerSimulator.py
@@ -21,7 +21,7 @@
 import pandas as pd
 import SigProfilerSimulator as sigSim
 import SigProfilerMatrixGenerator as sig
-from SigProfilerMatrixGenerator.scripts import SigProfilerMatrixGenerator as matRef
+from SigProfilerMatrixGenerator.scripts import MutationMatrixGenerator as matRef
 from SigProfilerMatrixGenerator.scripts import SigProfilerMatrixGeneratorFunc as matGen
 from . import mutational_simulator as simScript
 from SigProfilerMatrixGenerator.scripts import save_context_distribution as context_dist

diff --git a/SigProfilerSimulator/mutational_simulator.py b/SigProfilerSimulator/mutational_simulator.py
@@ -17,7 +17,7 @@
 import shutil
 import bisect
 import numpy as np
-from SigProfilerMatrixGenerator.scripts import SigProfilerMatrixGenerator as matRef
+from SigProfilerMatrixGenerator.scripts import MutationMatrixGenerator as matRef
 # from memory_profiler import profile
 # from pympler.tracker import SummaryTracker
 import pandas as pd

diff --git a/SigProfilerSimulator/version.py b/SigProfilerSimulator/version.py
@@ -1,6 +1,6 @@
 
 # THIS FILE IS GENERATED FROM SIGPROFILERSIMULATOR SETUP.PY
-short_version = '1.1.4'
-version = '1.1.4'
+short_version = '1.1.5'
+version = '1.1.5'
-Original file line number
+Diff line change
@@ Expand Up / @@ -3,6 +3,7 @@ @@
     # Setuptools distribution folder.
     /dist/
+    build/
     # Python egg metadata, regenerated from source files by setuptools.
     /*.egg-info
@@ Expand Down @@