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Update documentation for grid_outfile
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apcraig committed Jan 31, 2025
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1 change: 1 addition & 0 deletions doc/source/cice_index.rst
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Expand Up @@ -303,6 +303,7 @@ section :ref:`tabnamelist`.
"grid_ocn_dynu", "grid for ocn dynamic-u forcing/coupling fields, 'T', 'U', 'N', 'E'", ""
"grid_ocn_dynv", "grid for ocn dynamic-v forcing/coupling fields, 'T', 'U', 'N', 'E'", ""
"grid_ocn_thrm", "grid for ocn thermodynamic forcing/coupling fields, 'T', 'U', 'N', 'E'", ""
"grid_outfile", "write one-time grid history file", ""
"grid_type", "‘rectangular’, ‘displaced_pole’, ‘column’ or ‘regional’", ""
"gridcpl_file", "input file for coupling grid info", ""
"grow_net", "specific biogeochemistry growth rate per grid cell", "s :math:`^{-1}`"
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1 change: 1 addition & 0 deletions doc/source/user_guide/ug_case_settings.rst
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Expand Up @@ -313,6 +313,7 @@ grid_nml
"", "``B``", "ocn forcing/coupling grid, thermo fields on T grid, dyn fields on U grid", ""
"", "``C``", "ocn forcing/coupling grid, thermo fields on T grid, dynu fields on E grid, dynv fields on N grid", ""
"", "``CD``", "ocn forcing/coupling grid, thermo fields on T grid, dyn fields on N and E grid", ""
"``grid_outfile``", "logical", "write one-time grid history file"``.false.``"
"``grid_type``", "``displaced_pole``", "read from file in *popgrid*", "``rectangular``"
"", "``rectangular``", "defined in *rectgrid*", ""
"", "``regional``", "read from file in *popgrid*", ""
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7 changes: 7 additions & 0 deletions doc/source/user_guide/ug_implementation.rst
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Expand Up @@ -1347,6 +1347,13 @@ directory in **iceh_ic.[timeID].nc(da)**. Several history variables are
hard-coded for instantaneous output regardless of the ``hist_avg`` averaging flag, at
the frequency given by their namelist flag.

A one-time grid history file can be turned on with the ``grid_outfile`` namelist
variable. If ``grid_outfile`` is true, all the grid variables will be written
to a history file once at the start of the run. The grid data will only be written
for blocks that have not been eliminated by the decomposition. To generate a one-time
grid history file without land block elimination, set ``distribution_wght = 'blockall'``
and ``grid_outfile = .true.`` in the namelist.

The normalized principal components of internal ice stress (``sig1``, ``sig2``) are computed
in *principal_stress* and written to the history file. This calculation
is not necessary for the simulation; principal stresses are merely
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