move sloppyCellTest in with other unit tests

EmoryUniversityTheoreticalBiophysics · Apr 13, 2022 · 38e686d · 38e686d
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diff --git a/SirIsaac/sloppyCellTest.py b/SirIsaac/sloppyCellTest.py
diff --git a/test/test_SloppyCell.py b/test/test_SloppyCell.py
@@ -0,0 +1,38 @@
+# test_SloppyCell.py
+#
+# Bryan Daniels
+# 7/24/2013
+#
+# Tests whether SloppyCell is functional
+#
+
+import unittest
+
+from SirIsaac import fittingProblem
+import numpy as np
+from SloppyCell.ReactionNetworks import *
+
+class TestSloppyCell(unittest.TestCase):
+
+    def test_c_compiling(self):
+        m = fittingProblem.CTSNFittingModel(5,['a'],['b'])
+        n = m.net
+        n.compile()
+
+        # check that SloppyCell thinks the compiling worked
+        self.assertTrue(n.compiled)
+
+        # ensure compiled c code exists
+        ccode = n.get_c_code()
+        self.assertTrue(ccode in n._c_module_cache)
+        self.assertTrue(n._c_module_cache[ccode] is not None)
+
+    def test_CTSN(self):
+        m = fittingProblem.CTSNFittingModel(5,['a'],['b'])
+        r = m.evaluateVec(np.linspace(0,1,10),'b',[0])
+        eps = 1e-5
+        return sum(r**2) < eps
+
+
+if __name__ == '__main__':
+    unittest.main()