Run Tests in GitHub Actions using the Production DEA ODC Database #1100
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| name: Test DEA Notebooks with RDS Connection | |
| on: | |
| push: | |
| branches: [ develop, stable, nbtests ] | |
| paths-ignore: | |
| - '**/*.md' # ignore markdown files | |
| - '**/*.rst' # ignore restructured text files | |
| - '.github/**' # ignore anything in .github folder | |
| - '!.github/workflows/test_notebooks.yml' # except test_notebooks.yml | |
| pull_request: | |
| branches: [ develop, stable ] | |
| paths-ignore: | |
| - '**/*.md' | |
| - '**/*.rst' | |
| - '.github/**' | |
| - '!.github/workflows/test_notebooks.yml' | |
| # on: | |
| # schedule: | |
| # # Runs at 5:25 AM UTC every day | |
| # - cron: '25 5 * * *' | |
| # # Optional: Allow manual triggering through GitHub UI | |
| # workflow_dispatch: | |
| permissions: | |
| id-token: write # Required for OIDC authentication to AWS | |
| contents: read | |
| jobs: | |
| test-notebooks: | |
| runs-on: ubuntu-latest | |
| # Automatically activate our mamba environment when it's ready | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| path: dea-notebooks | |
| - name: Set up database access and tests | |
| uses: ./dea-notebooks/.github/actions/test_setup | |
| - name: Open Port Forward to RDS | |
| run: | | |
| npx basti connect \ | |
| --custom-target-vpc vpc-086904199e505c1f6 \ | |
| --custom-target-host db-aurora-dea-sandbox-eks-1.cos5zfpkso9m.ap-southeast-2.rds.amazonaws.com \ | |
| --custom-target-port 5432 \ | |
| --local-port 5432 & | |
| # Wait until the connection comes up, but, if it doesn't, don't hang forever. | |
| npx wait-on --timeout 120000 --interval 1000 tcp:127.0.0.1:5432 | |
| echo "PGPORT=5432" >> $GITHUB_ENV | |
| echo "PGHOST=localhost" >> $GITHUB_ENV | |
| - name: Run the Notebook tests | |
| run: | | |
| sudo chown -R 1000:100 ./dea-notebooks | |
| cd ./dea-notebooks | |
| docker run --rm \ | |
| --net=host \ | |
| --env DATACUBE_DB_URL \ | |
| --env AWS_SESSION_TOKEN \ | |
| --env AWS_REGION \ | |
| --env AWS_ACCESS_KEY_ID \ | |
| --env AWS_SECRET_ACCESS_KEY \ | |
| --env AWS_SESSION_TOKEN \ | |
| --volume ${GITHUB_WORKSPACE}/dea-notebooks:/home/jovyan/dea-notebooks \ | |
| --volume ${GITHUB_WORKSPACE}/tide_models:/var/share/tide_models \ | |
| --env GDAL_HTTP_MAX_RETRY=3 \ | |
| --entrypoint /bin/bash \ | |
| 538673716275.dkr.ecr.ap-southeast-2.amazonaws.com/geoscienceaustralia/sandbox:stable \ | |
| /home/jovyan/dea-notebooks/Tests/test_notebooks.sh |