v0.8.0

What's Changed

This release mainly improves the user experience when working with the clustering workflow. The changes you will notice are:

• BREAKING CHANGE: When calculating a umap, no label mask is created anymore.Instead, this map is now computed in the background within napari and is transparent to the user. This also means that you don't have to select a label layer anymore when loading a umap (PR #82 MPI-Dortmund/napari-tomotwin#22). However, this is a breaking change, so you need to recalculate your umaps to take advantage of it.
• Napari no longer freezes when loading umaps and shows a progress bar while loading (MPI-Dortmund/napari-tomotwin#20)
• When selecting clusters in the umap, there is a time delay between the selection and the actual highlighting. Now this process is 2x-3x faster (PR BiAPoL/napari-clusters-plotter#283 BiAPoL/napari-clusters-plotter#282)
• When saving cluster targets, the appropriate embedding file is automatically selected if possible (PR MPI-Dortmund/napari-tomotwin#26). This means that the user does not have to remember which embedding belongs to which umap.
• Saving cluster targets (medoids) is now 5x faster (MPI-Dortmund/napari-tomotwin#23).

Minor changes

• Add median filter strategy by @GavinR1 in #76 and #79
• Stop making tomotwin_tools crash on non gpu machines. by @thorstenwagner in #78
• Add short training tutorial by @thorstenwagner in #81

Full Changelog: 0.7.0...v0.8.0