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Add anndata factory#255

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mschwoer wants to merge 17 commits intoadapt_to_removal_of_dev_branchMannLabs/alphabase:adapt_to_removal_of_dev_branchfrom add_anndata_factoryMannLabs/alphabase:add_anndata_factoryCopy head branch name to clipboard

+532-22

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Commits on Jan 23, 2025

• add first anndata conversion

  mschwoer

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  58618cf

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• add first anndata conversion

  mschwoer

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  de6fea2

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• add anndata dependency

  mschwoer

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  d41afc0

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• add possibility to add custom column mapping

  mschwoer

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  f8e71e4

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• nice error message on unsupported readers

  mschwoer

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  f8cc6c8

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• refactor and add unit tests

  mschwoer

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  793a8a6

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• add tutorial notebook

  mschwoer

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  d7638f8

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• add anndata tests

  mschwoer

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  e92898d

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• use only first protein

  mschwoer

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• add reference data

  mschwoer

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  4b8a23f

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• add potentially correct columns

  mschwoer

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  43efb0e

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• use potentially correct columns

  mschwoer

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  900ae06

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• add intensity column to diann output

  mschwoer

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  eca0e0d

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• adapt test references

  mschwoer

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  979a334

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• fix merge conflicts

  mschwoer

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  577647e

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• reorder

  mschwoer

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  2ba3087

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• relax anndata requirement

  mschwoer

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