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Fix parsing bug where includes are skipped #122

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These files were overwritten during the `brew link` step:

libsodium 1.0.20 is already installed and up-to-date. To reinstall 1.0.20, run: brew reinstall libsodium

pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf

Treating cmake as a formula. For the cask, use homebrew/cask/cmake or specify the `--cask` flag. To silence this message, use the `--formula` flag.