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r: add db_tables
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jeffwalkernoaa committed Mar 13, 2024
1 parent f7cfb14 commit bd26152
Showing 1 changed file with 10 additions and 0 deletions.
10 changes: 10 additions & 0 deletions r/cli/functions.R
Original file line number Diff line number Diff line change
Expand Up @@ -86,7 +86,12 @@ load_db_tables <- function () {
log_info("fetching support tables from database")
E_PACM_METADATA <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.E_PACM_METADATA;")
I_EQPMNT_DEPLOYMENT <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.I_EQPMNT_DEPLOYMENT;")
I_EQPMNT_INVNTRY <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.I_EQPMNT_INVNTRY;")
S_EQPMNT_INVNTRY_TYPE <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.S_EQPMNT_INVNTRY_TYPE;")
I_INVENTORY_DEPLOYMENT <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.I_INVENTORY_DEPLOYMENT;")
I_RECORDING <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.I_RECORDING;")
S_PROJECT <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.S_PROJECT;")
S_SITE <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.S_SITE;")
S_CALL_LIBRARY <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.S_CALL_LIBRARY;")
S_SPECIES <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.S_SPECIES;")
S_CALL_TYPE <- DBI::dbGetQuery(con, "SELECT * FROM PAGROUP.S_CALL_TYPE;")
Expand All @@ -101,7 +106,12 @@ load_db_tables <- function () {
list(
metadata = as_tibble(E_PACM_METADATA),
deployment = as_tibble(I_EQPMNT_DEPLOYMENT),
inventory = as_tibble(I_EQPMNT_INVNTRY),
inventory_type = as_tibble(S_EQPMNT_INVNTRY_TYPE),
inventory_deployment = as_tibble(I_INVENTORY_DEPLOYMENT),
recording = as_tibble(I_RECORDING),
project = as_tibble(S_PROJECT),
site = as_tibble(S_SITE),
species = as_tibble(S_SPECIES) %>%
select(SPECIES_ID, SPECIES_CODE = PACM_SPECIES_CODE) %>%
filter(!is.na(SPECIES_CODE)),
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