enh: add relative startup and refined config

bmm_agents/startup_scripts/mmm5-tax-day/Pt_KmeansMonarch.py

@@ -17,15 +17,18 @@
 pdf_objects = PDFBaseAgent.get_beamline_objects()
 pdf_objects["qserver"].set_authorization_key(api_key=os.getenv("HTTPSERVER_API_KEY", "yyyyy"))
 
+old_mmm4_origin = [[186.307, 89.276], [186.384, 89.305]]
+new_mmm5_origin = [[174.550, 103.806], [175.127, 103.484]]
+
 agent = KMeansMonarchSubject(
     filename="PtNi-Multimodal-PtDrivenKmeans",
     exp_mode="fluorescence",
     read_mode="transmission",
     exp_data_type="mu",
     elements=["Pt", "Ni"],
     edges=["L3", "K"],
-    element_origins=[[186.307, 89.276], [186.384, 89.305]],
-    element_det_positions=[185, 160],
+    element_origins=new_mmm5_origin,
+    element_det_positions=[180, 110],
     sample="AlPtNi wafer pretend-binary PtNi",
     preparation="AlPtNi codeposited on a silica wafer",
     exp_bounds="-200 -30 -10 25 13k",
@@ -37,7 +40,7 @@
     subject_endstation_key="pdf",
     pdf_origin=(17.574, 4.075),
     # Active Kmeans Args
-    bounds=np.array([(-32, 32), (-32, 32)]),
+    bounds=np.array([(-31, 31), (-31, 31)]),
     # BS Adaptive Args
     ask_on_tell=False,
     report_on_tell=True,
@@ -51,13 +54,15 @@
 @startup_decorator
 def startup():
     agent.start()
-    path = "/nsls2/data/bmm/shared/config/source/bmm-agents/bmm_agents/startup_scripts/historical_Pt_uids.txt"
+    path = "/nsls2/data/bmm/shared/config/source/bmm-agents/bmm_agents/startup_scripts/historical_mmm4_uids.txt"
     with open(path, "r") as f:
         uids = []
         for line in f:
             uids.append(line.strip().strip(",").strip("'"))
 
+    agent.element_origins = old_mmm4_origin
     agent.tell_agent_by_uid(uids)
+    agent.element_origins = new_mmm5_origin
 
 
 @shutdown_decorator

bmm_agents/startup_scripts/mmm5-tax-day/Pt_kmeans.py

@@ -9,21 +9,25 @@
 beamline_objects = MultiElementActiveKmeansAgent.get_beamline_objects()
 beamline_objects["qserver"].set_authorization_key(api_key=os.getenv("HTTPSERVER_API_KEY", "zzzzz"))
 
+
+old_mmm4_origin = [[186.307, 89.276], [186.384, 89.305]]
+new_mmm5_origin = [[174.550, 103.806], [175.127, 103.484]]
+
 agent = MultiElementActiveKmeansAgent(
     filename="PtNi-Multimodal-PtDrivenKmeans",
     exp_mode="fluorescence",
     read_mode="transmission",
     exp_data_type="mu",
     elements=["Pt", "Ni"],
     edges=["L3", "K"],
-    element_origins=[[186.307, 89.276], [186.384, 89.305]],
-    element_det_positions=[185, 160],
+    element_origins=new_mmm5_origin,
+    element_det_positions=[180, 110],
     sample="AlPtNi wafer pretend-binary PtNi",
     preparation="AlPtNi codeposited on a silica wafer",
     exp_bounds="-200 -30 -10 25 13k",
     exp_steps="10 2 0.5 0.05k",
     exp_times="1 1 1 1",
-    bounds=np.array([(-32, 32), (-32, 32)]),
+    bounds=np.array([(-31, 31), (-31, 31)]),
     ask_on_tell=False,
     report_on_tell=True,
     k_clusters=6,
@@ -35,13 +39,15 @@
 @startup_decorator
 def startup():
     agent.start()
-    path = "/nsls2/data/bmm/shared/config/source/bmm-agents/bmm_agents/startup_scripts/historical_Pt_uids.txt"
+    path = "/nsls2/data/bmm/shared/config/source/bmm-agents/bmm_agents/startup_scripts/historical_mmm4_uids.txt"
     with open(path, "r") as f:
         uids = []
         for line in f:
             uids.append(line.strip().strip(",").strip("'"))
 
+    agent.element_origins = old_mmm4_origin
     agent.tell_agent_by_uid(uids)
+    agent.element_origins = new_mmm5_origin
 
 
 @shutdown_decorator