A workshop on detecting positive selection. The workshop introduces PBS and iHS approaches.
It usable and instructive as is, but it is still in development.
To get started run:
git clone https://github.com/NovembreLab/1000genomes_Selection_Exercise
cd 1000genomes_Selection_Exercise
Then
wget https://repo.continuum.io/miniconda/Miniconda2-latest-Linux-x86_64.sh
chmod 755 Miniconda2-latest-Linux-x86_64.sh
./Miniconda2-latest-Linux-x86_64.sh
Agree to everything that the installation of conda asks you to do then run:
source ~/.bashrc
conda env create -f selection_exercise_environment.yml
And then:
source activate selex