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Independent seeds: list of updated families
Anton Petrov edited this page Apr 15, 2020
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10 revisions
- RF01380 first test, short model
- RF03000 test on Zasha family
- RF01074 SS_cons2 removed, pknots conserved
- RF01078 SS_cons2 removed, pknots conserved
- RF01089 SS_cons2 removed, pknots conserved
- RF01264 SS_cons2 removed
- RF01271 SS_cons2 removed
- RF00857 Ioanna requested, GA change
- RF00210 RF added
- RF01879 SS_cons2 removed, lncRNA - basepairs removed
- RF00628 Raised threshold, added reference, fixed RNA type typo
- RF02853 Fixed RNA type typo
- RF02701 Fixed RNA type typo
- RF00064 Fixed RNA type typo
- RF00182 Coronavirus updates
- RF00165 Coronavirus updates
- RF00164 Coronavirus updates
- RF00507 Coronavirus updates
Models to add once new code stabilizes
- Group I intron models from GISSD
- archaeal Group I intron models
- Franz Lang's 5S mitochondrial model (fig 2A https://academic.oup.com/nar/article/42/22/13764/2411797)