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Independent seeds: list of updated families

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Eric Nawrocki edited this page Jun 19, 2019 · 10 revisions
  • RF01380 first test, short model
  • RF03000 test on Zasha family
  • RF01074 SS_cons2 removed, pknots conserved
  • RF01078 SS_cons2 removed, pknots conserved
  • RF01089 SS_cons2 removed, pknots conserved
  • RF01264 SS_cons2 removed
  • RF01271 SS_cons2 removed
  • RF00857 Ioanna requested, GA change
  • RF00210 RF added
  • RF01879 SS_cons2 removed, lncRNA - basepairs removed

Models to add once new code stabilizes

  • Group I intron models from GISSD
  • archaeal Group I intron models
  • Franz Lang's 5S mitochondrial model (fig 2A
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