more additions to lab manual

Added more information, made edits, made headings for Analysis section
SEFSC · Nov 22, 2024 · 8e98bbf · 8e98bbf
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diff --git a/content/AnalysisMethods.qmd b/content/AnalysisMethods.qmd
@@ -2,6 +2,45 @@
 title: Analysis Methods
 ---
 
+## Raw Acoustic Data
+
+
+## Marine Mammal Acoustics
+
+### Odontocete Analyses
+
+#### click Classification
+
+#### Density Estimation
+
+#### Beaked Whale Tracking for Denisty Estimation Parameterization
+
+
+### Mysticete Whale Analyses
+
+#### Rice's Whale Automated Call Detectors
+
+#### Long-Moan Detector Settings
+
+#### Downsweep Pulse Sequence Detector Settings
+
+#### Validation of Automated Call Detections
+
+
+## Ambient and Anthropogenic Noise Analyses
+
+### Ambient Noise Levels
+
+### Broadband Ships
+
+### Ship Radiated Noise Levels and Monopole Source Levels
+
+### Seismic Airguns
+
+
+
+
+
 An analysis methods section is required and should include the following information;
 
 -   Data Prep and Archive

diff --git a/content/FieldMethods.qmd b/content/FieldMethods.qmd
@@ -24,7 +24,8 @@ SAILDAQ Setup
 
 Sonobuoy Setup
 
-[Soundtrap Mooring Deployment Preparation](https://docs.google.com/document/d/1_8XXEVWuo_R67LYu3DJqrmeIjS2swaxR/edit?usp=drive_link&ouid=108853723995482129268&rtpof=true&sd=true)
+[Soundtrap Mooring Deployment Preparation]()
+<!-- (https://docs.google.com/document/d/1_8XXEVWuo_R67LYu3DJqrmeIjS2swaxR/edit?usp=drive_link&ouid=108853723995482129268&rtpof=true&sd=true) -->
 
 
 ## Protocols

diff --git a/content/Onboarding.qmd b/content/Onboarding.qmd
@@ -2,6 +2,15 @@
 title: Onboarding
 ---
 
+## New Staff
+
+## New Interns and Volunteers
+
+### Sperm whale analysis
+
+[Getting Started - Sperm Whale 3D Tracking Project](https://docs.google.com/document/d/1dZIGURhCEpHqiqKNrRGJXT7Fx7sGwGP6/edit?usp=drive_link&ouid=108853723995482129268&rtpof=true&sd=true)
+
+
 This page is optional but can be used as a landing page for new lab members. You can include introductory information, links to must read papers, new hire resources, goal setting information, etc.
 
 [Faylab example](https://thefaylab.github.io/lab-manual/04-onboarding.html)
diff --git a/index.qmd b/index.qmd
@@ -16,9 +16,10 @@ This lab manual serves as the go-to handbook for the behind-the-scenes informati
 
 ## Team Members
 
-### Principal Investigator
+### Program Lead
 
-[Melissa Soldevilla](https://www.fisheries.noaa.gov/contact/melissa-soldevilla-phd), Passive Acoustic Ecology Program Lead
+[Melissa Soldevilla](https://www.fisheries.noaa.gov/contact/melissa-soldevilla-phd)
+<!-- Passive Acoustic Ecology Program Lead -->
 
 ### Researchers
 
@@ -28,7 +29,7 @@ This lab manual serves as the go-to handbook for the behind-the-scenes informati
 
 [Lynne Hodge](https://www.fisheries.noaa.gov/contact/lynne-hodge-phd), Acoustic technician for LISTEN GoMex project, shipping noise and marine mammal characterization
 
-[Ludovic Tenorio](https://www.fisheries.noaa.gov/contact/ludovic-tenorio-halle-phd), Rice’s whale studies
+[Ludovic Tenorio-Halle](https://www.fisheries.noaa.gov/contact/ludovic-tenorio-halle-phd), Rice’s whale studies, propagation modeling, ambient noise
 
 ### Graduate Students