Data Analysis for Genomics, De Bruijn Graph Chain Merging Compacting.
-There are 2 python scripts, each one has a different approach when dealing with data structures resulting in overall different complexity.
-Here are some use cases, visualization with sequence label drawn, using networkx and matplotlib libraries to visualize the graph. :
-Test Case 1 De Bruijn Graph :
-Test Case 1 Compacted Graph Shape 1 :
-Test Case 1 Compacted Graph Shape 2 :
-Test Case 1 Printing Console :
-Test Case 2 De Bruijn Graph :
-Test Case 1 Compacted Graph Shape 1 :
-Test Case 1 Printing Console :
-Test Case 3 De Bruijn Graph :
-Test Case 3 Compacted Graph Shape 1 :
-Test Case 3 Printing Console :
