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Fix(vignette fix): switch commit
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patrickCNMartin committed Dec 3, 2024
1 parent 8b0a4d8 commit 5e66158
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3 changes: 3 additions & 0 deletions .Rbuildignore
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^\.github$
^src/\.cargo$
^_pkgdown\.yml$
^docs$
^pkgdown$
1 change: 1 addition & 0 deletions .gitignore
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.RData
.Ruserdata
.DS_Store
docs
4 changes: 2 additions & 2 deletions vignettes/vesalius.Rmd
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Expand Up @@ -424,11 +424,11 @@ From here, we can treat this new object as a frech data sets with new coordinate
matched <- generate_embeddings(matched,
dim_reduction = "PCA",
nfeatures = 200,
verbose = FALSE) %>%
verbose = FALSE)
matched <- regularise_image(matched, lambda = 1)
matched <- smooth_image(matched, sigma = 5, iter = 10)
matched <- equalize_image(matched, sleft = 5, sright = 5)
matched <- segment_image(col_resolution = 2)
matched <- segment_image(matched,col_resolution = 2)
```
We can then look at the resulting embeddings

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