Skip to content

Commit

Permalink
docs update
Browse files Browse the repository at this point in the history
  • Loading branch information
Yunuuuu committed Jan 8, 2025
1 parent fafcf2d commit d6907c0
Show file tree
Hide file tree
Showing 2 changed files with 28 additions and 28 deletions.
28 changes: 14 additions & 14 deletions README.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -81,27 +81,27 @@ remotes::install_github("Yunuuuu/ggalign")
| **User Interface** | Declarative | Functional | Declarative | Functional | Declarative |
| **Plot System** | ggplot2 (Advanced plot system built on grid system) | grid | Matplotlib | ggplot2 (Advanced plot system built on grid system) | ggplot2 (Advanced plot system built on grid system) |
| **Focus** | Composable Visualization | Heatmap | Composable Visualization | Heatmap | tree Data |
| **Heatmap Layout** | Yes | Yes | Yes | Yes | No |
| **Marginal Layout** | Yes | No | Yes | No | No |
| **Stack Layout** | Yes | Yes | Yes | No | No |
| **Circle Layout** | Yes | No | No | No | Yes |
| **Cross Layout** | Yes | No | No | No | No |
| **Group or Reorder Heatmap** | Yes | Yes | Yes | Yes | No |
| **Group or Reorder Stack Only** | Yes | No | Yes | No | No |
| **Separate Group into Slices** | Yes | Yes | Yes | No | No |
| **Heatmap Layout** | | | | | No |
| **Marginal Layout** | | No | | | |
| **Stack Layout** | | | | | |
| **Circle Layout** | | | | | |
| **Cross Layout** | | | | | |
| **Group or Reorder Heatmap** | | | | | |
| **Group or Reorder Stack Only** | | | | | |
| **Separate Group into Slices** | | | | | |
| **Data input** | Various, and can be easily extended | fixed | fixed | fixed | Various, and can be easily extended |
| **Visualization Type** | Wide variety, provided by ggplot2 | Many, but limited | Many, but limited | Limited | Limited Geometric layers support |
| **Legends Creation** | Automatic | Limited automatic, requires manual add | Manual | Automatic | Automatic |
| **Legends Position** | Anywhere, can be controlled for a single plot | Four sides, can only be placed on one side at a time | ? | Four sides, can only be placed on one side at a time | Anywhere |
| **Scientific Color Palettes** | Many | Limited | Limited | Many | Many |
| **Tanglegram** | Yes | No | Yes | No | No |
| **Tanglegram** | | | | | |
| **Dendrogram Position** | Anywhere | Heatmap only | Anywhere | Heatmap only | Anywhere |
| **3D Heatmap** | Yes | Yes | No | No | No |
| **Oncoplot** | Yes | Yes | Yes | No | No |
| **UpSet plot** | Yes | Yes | Yes | No | No |
| **Fully Compatible with ggplot2** | Yes | No | No | No | Limited Geometric layers support |
| **3D Heatmap** | | | | | |
| **Oncoplot** | | | | | |
| **UpSet plot** | | | | | |
| **Fully Compatible with ggplot2** | | | | | Limited Geometric layers support |
| **Ease of Use** | Easy for ggplot2 users | Easy for for grid user | Easy for python user | Easy | Easy for ggplot2 users |
| **Interactive** | No | Yes | No | No | No |
| **Interactive** | | | | | |

## Acknowledgements
I would like to express my sincere gratitude to the contributors of the
Expand Down
Loading

0 comments on commit d6907c0

Please sign in to comment.