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more CRAN link fixes
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adokter committed May 9, 2022
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1 change: 1 addition & 0 deletions .Rbuildignore
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Expand Up @@ -14,3 +14,4 @@ pkgdown/
cran-comments.md
inst/extdata/vpts.txt.zip
^\.github$
^CRAN-SUBMISSION$
2 changes: 1 addition & 1 deletion NEWS.md
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Expand Up @@ -184,7 +184,7 @@ First release on CRAN! All issues included in this release can be found [here](h

* Details for deprecated functions `mt()`, `mtr()`, `cmt()` are now displayed with function (#166).

* [README](https://adriaandokter.com/bioRad) reviewed for easier installation and usage (#155).
* [README](https://adriaandokter.com/bioRad/) reviewed for easier installation and usage (#155).

* [Get started vignette](https://adriaandokter.com/bioRad/articles/bioRad.html) is now based on figure and workflow from [Dokter et al.](https://doi.org/10.1111/ecog.04028) (#168).

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6 changes: 3 additions & 3 deletions README.Rmd
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Expand Up @@ -35,7 +35,7 @@ More vignettes:

* [Range correction](https://adriaandokter.com/bioRad/articles/range_correction.html): estimate spatial images of vertically integrated density corrected for range effects.

Documentation for the latest development version can be found [here](https://adriaandokter.com/bioRad/dev).
Documentation for the latest development version can be found [here](https://adriaandokter.com/bioRad/dev/).

## Installation

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You need to install Docker to:

* Process radar data into vertical profiles of biological targets with `calculate_vp()`.
* Read [NEXRAD radar data](https://registry.opendata.aws/noaa-nexrad/) or [IRIS RAW](ftp://ftp.sigmet.com/outgoing/manuals/IRIS_Programmers_Manual.pdf) data with `read_pvolfile()`. Docker is not required for reading ODIM radar data.
* Read [NEXRAD radar data](https://registry.opendata.aws/noaa-nexrad/) or [IRIS RAW](ftp://ftp.sigmet.com/outgoing/manuals//IRIS-Programming-Guide-M211318EN.pdf) data with `read_pvolfile()`. Docker is not required for reading ODIM radar data.
* Convert NEXRAD radar data to ODIM format with `nexrad_to_odim()`.
* Use the [MistNet](https://doi.org/10.1111/2041-210X.13280) neural network with `calculate_vp()` or `apply_mistnet()`

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### Radar data example

bioRad can read weather radar data (= polar volumes) in the [`ODIM`](http://eumetnet.eu/wp-content/uploads/2017/01/OPERA_hdf_description_2014.pdf) format and formats supported by the [RSL library](http://trmm-fc.gsfc.nasa.gov/trmm_gv/software/rsl/), such as NEXRAD data. NEXRAD data (US) are [available as open data](https://www.ncdc.noaa.gov/nexradinv/) and on [AWS](https://registry.opendata.aws/noaa-nexrad/).
bioRad can read weather radar data (= polar volumes) in the [`ODIM`](http://eumetnet.eu/wp-content/uploads/2017/01/OPERA_hdf_description_2014.pdf) format and formats supported by the [RSL library](https://trmm-fc.gsfc.nasa.gov/trmm_gv/software/rsl/), such as NEXRAD data. NEXRAD data (US) are [available as open data](https://www.ncdc.noaa.gov/nexradinv/) and on [AWS](https://registry.opendata.aws/noaa-nexrad/).

Here we read an example polar volume data file with `read_pvolfile()`, extract the scan/sweep at elevation angle 3 with `get_scan()`, project the data to a plan position indicator with `project_as_ppi()` and plot the _radial velocity_ of detected targets with `plot()`:

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6 changes: 3 additions & 3 deletions README.md
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Expand Up @@ -41,7 +41,7 @@ More vignettes:
for range effects.

Documentation for the latest development version can be found
[here](https://adriaandokter.com/bioRad/dev).
[here](https://adriaandokter.com/bioRad/dev/).

## Installation

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`calculate_vp()`.
- Read [NEXRAD radar data](https://registry.opendata.aws/noaa-nexrad/)
or [IRIS
RAW](ftp://ftp.sigmet.com/outgoing/manuals/IRIS_Programmers_Manual.pdf)
RAW](ftp://ftp.sigmet.com/outgoing/manuals//IRIS-Programming-Guide-M211318EN.pdf)
data with `read_pvolfile()`. Docker is not required for reading ODIM
radar data.
- Convert NEXRAD radar data to ODIM format with `nexrad_to_odim()`.
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bioRad can read weather radar data (= polar volumes) in the
[`ODIM`](http://eumetnet.eu/wp-content/uploads/2017/01/OPERA_hdf_description_2014.pdf)
format and formats supported by the [RSL
library](http://trmm-fc.gsfc.nasa.gov/trmm_gv/software/rsl/), such as
library](https://trmm-fc.gsfc.nasa.gov/trmm_gv/software/rsl/), such as
NEXRAD data. NEXRAD data (US) are [available as open
data](https://www.ncdc.noaa.gov/nexradinv/) and on
[AWS](https://registry.opendata.aws/noaa-nexrad/).
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2 changes: 1 addition & 1 deletion vignettes/rad_aero_19.Rmd
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### 3.1 Obtaining radar data

* US NEXRAD polar volume data can be accessed in the [Amazon cloud](https://s3.amazonaws.com/noaa-nexrad-level2/index.html).
* European radar data can be accessed at http://enram.github.io/data-repository/. These are processed vertical profiles, the full polar volume data are not openly available for most countries.
* European radar data can be accessed at https://aloftdata.eu. These are processed vertical profiles, the full polar volume data are not openly available for most countries.

The names of the radars in the networks can be found here:

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