Update HPO data to 2024-04-26

anergictcell · Jun 16, 2024 · 5ea91a5 · 5ea91a5
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diff --git a/CHANGELOG.rst b/CHANGELOG.rst
@@ -1,6 +1,10 @@
 Changelog
 =========
 
+3.3.1
+-----
+Data update to 2024-04-26
+
 3.3.0
 -----
 Fix JC similarity algoritm (see https://github.com/anergictcell/pyhpo/issues/20 for details)

diff --git a/RELEASE_CHECKLIST.md b/RELEASE_CHECKLIST.md
@@ -17,3 +17,11 @@ Before creating a new release, follow all the below steps:
 - [ ] Crate version tag, push tag
 - [ ] Merge into master
 
+Update data:
+1. Update ruff, black and mypy `pip install -U ruff mypy black`
+2. pull latest changes of master
+3. create new branch
+4. run black and ruff fixes
+5. Commit changes
+6. run python script to download new data
+7. Get numbers of terms, diseases etc, update integration-test
diff --git a/pyhpo/__init__.py b/pyhpo/__init__.py
@@ -11,7 +11,7 @@
 
 # The following info will be used by setup.py and sphinx documentation
 __author__ = "Jonas Marcello"
-__version__ = "3.3.0"
+__version__ = "3.3.1"
 
 __all__ = (
     "Annotation",

diff --git a/pyhpo/data/hp.obo b/pyhpo/data/hp.obo