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@aofarrel aofarrel released this 15 Apr 01:00
· 348 commits to main since this release
4.1.1
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Learn about vigilant mode.

edit: This version of myco does not handle multi-run BioSample accessions correctly and should not be used

Updates myco_sra with these new features:

  • edirect should always give run accessions now (fix pulled from v1.1.9 of a SRANWRP task)
  • strain and resistance information will be pulled from TBProfiler
  • TBProfiler txt files will now be output, because they're prettier than the JSONs

Other versions of myco do not use the pull part of SRANWRP, nor TBProfiler, so they are unaffected.

What's Changed

  • Update myco_sra to pull strain and resistance information, fix some accessions getting no output by @aofarrel in #22

Full Changelog: 4.1.0...4.1.1

Contributors

aofarrel
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