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MAINT: update rescript citation (#120)
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mikerobeson authored Nov 10, 2021
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4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -59,7 +59,7 @@ These tutorials demonstrate some of the basic functionality of RESCRIPt, via the
- [Building a COI database with BOLD sequences](https://forum.qiime2.org/t/building-a-coi-database-from-bold-references/16129)
- [Building a COI database with NCBI sequences](https://forum.qiime2.org/t/building-a-coi-database-from-ncbi-references/16500)

Examples of visualizations produced by RESCRIPt actions can be found in this [Visualization Gallery](https://forum.qiime2.org/t/processing-filtering-and-evaluating-the-silva-database-and-other-reference-sequence-data-with-rescript/15494#heading--seventeenth-header).
Examples of visualizations produced by RESCRIPt actions can be found in this [Visualization Gallery](https://forum.qiime2.org/t/processing-filtering-and-evaluating-the-silva-database-and-other-reference-sequence-data-with-rescript/15494#heading--seventeenth-header).

## Getting Help
Problem? Suggestion? Technical errors and user support requests can be filed on the [QIIME 2 Forum](https://forum.qiime2.org/).
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If you use RESCRIPt in your research, please cite the following pre-print:

Michael S Robeson II, Devon R O'Rourke, Benjamin D Kaehler, Michal Ziemski, Matthew R Dillon, Jeffrey T Foster, Nicholas A Bokulich. RESCRIPt: Reproducible sequence taxonomy reference database management for the masses. bioRxiv 2020.10.05.326504; doi: https://doi.org/10.1101/2020.10.05.326504
Michael S Robeson II, Devon R O'Rourke, Benjamin D Kaehler, Michal Ziemski, Matthew R Dillon, Jeffrey T Foster, Nicholas A Bokulich. (2021) *RESCRIPt: Reproducible sequence taxonomy reference database management*. PLoS Computational Biology 17 (11): e1009581. doi: [10.1371/journal.pcbi.1009581](http://dx.doi.org/10.1371/journal.pcbi.1009581).


## License
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15 changes: 6 additions & 9 deletions rescript/citations.bib
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@article {Robeson2020rescript,
@article {Robeson2021rescript,
author = {Robeson, Michael S and O{\textquoteright}Rourke, Devon R and Kaehler, Benjamin D and Ziemski, Michal and Dillon, Matthew R and Foster, Jeffrey T and Bokulich, Nicholas A},
title = {RESCRIPt: Reproducible sequence taxonomy reference database management for the masses},
elocation-id = {2020.10.05.326504},
year = {2020},
doi = {10.1101/2020.10.05.326504},
publisher = {Cold Spring Harbor Laboratory},
URL = {https://www.biorxiv.org/content/early/2020/10/05/2020.10.05.326504},
eprint = {https://www.biorxiv.org/content/early/2020/10/05/2020.10.05.326504.full.pdf},
journal = {bioRxiv}
title = {RESCRIPt: Reproducible sequence taxonomy reference database management},
year = {2021},
doi = {10.1371/journal.pcbi.1009581},
publisher = {PLoS Computational Biology},
URL = {http://dx.doi.org/10.1371/journal.pcbi.1009581}
}

@article{rognes2016vsearch,
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2 changes: 1 addition & 1 deletion rescript/plugin_setup.py
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description=('Reference sequence annotation and curation pipeline.'),
short_description=(
'Pipeline for reference sequence annotation and curation.'),
citations=[citations['Robeson2020rescript']]
citations=[citations['Robeson2021rescript']]
)


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