Build docker distributed STAR + samtools

3rd-party-tools/samtools-dist-star/Dockerfile

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+# Adding a platform tag to ensure that images built on ARM-based machines doesn't break pipelines
+FROM --platform="linux/amd64"  ubuntu:22.04
+
+ENV TERM=xterm-256color 
+
+LABEL MAINTAINER="Broad Institute DSDE <dsde-engineering@broadinstitute.org>" 
+
+WORKDIR /usr
+
+# Install dependencies
+RUN set -eux; \
+    apt update; \
+    apt-get install -y autoconf automake bash bzip2 gcc wget make libncurses5-dev zlib1g-dev libbz2-dev liblzma-dev numactl; \
+    apt-get install -y build-essential git; \
+
+    # Install open omics acceleration framework
+    mkdir temp; \
+    ls; \
+    pwd; \
+    cd temp; \
+    # clone fork of Open-Omics-Acceleration-Framework with changes added for input/output
+    git clone --recursive https://github.com/aawdeh/Open-Omics-Acceleration-Framework.git; \
+
+    # install packages 
+    cd Open-Omics-Acceleration-Framework; \
+    git checkout aa-optimus; \
+
+
+    cd pipelines/optimus_starsolo; \
+    ./install.sh; \
+
+    # Tini
+    cd /usr/temp; \
+    wget https://github.com/krallin/tini/releases/download/v0.19.0/tini -O /usr/bin/tini; \
+    chmod +x /usr/bin/tini; \
+
+    # Clean up cached files
+    apt-get clean && rm -rf /var/lib/apt/lists/*
+
+# Set tini as default entrypoint
+ENTRYPOINT [ "/usr/bin/tini", "--" ]