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bvhpatel edited this page Jul 9, 2020 · 26 revisions

Welcome to the SODA User Manual!

We document here everything there is to know about SODA. Please navigate through the sidebar to find out more about SODA and the different features that are available to organize and submit your SPARC datasets.

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Overview

Getting started

Download and open SODA

User interface

Organize and submit SPARC datasets with SODA

Beta testing

Privacy Policy

Manage Datasets

Connect your Pennsieve account with SODA

Create a new dataset

Rename an existing dataset

Make PI owner of dataset

Add edit permissions

Add edit subtitle

Add edit description

Upload a banner image

Assign a license

Upload a local dataset to Pennsieve

View and change status

Prepare Metadata

Connect your Airtable account with SODA

Create submission.xlsx

Create dataset_description.xlsx

Create subjects.xlsx

Create samples.xlsx

Download templates

Prepare Datasets

Organize dataset

Disseminate Datasets

Share with Curation Team

Share with SPARC Consortium

Submit for pre-publishing review

Common errors and their solutions

Installing the Pennsieve Agent

Pennsieve Agent is already running

Sending log files to SODA Team

Issues regarding hidden files or folders

Developer guidelines

Using the source code

Packaging

"How to" SPARC series

How to structure the submission metadata file

How to structure the dataset_description metadata file

How to structure the subjects metadata file

How to structure the samples metadata file

How to structure the manifest metadata file

How to get your Data Deliverables document

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