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Packaging
Package Python code with PyInstaller
- Run anaconda prompt, activate the conda environment (if you haven't done that already)
- Navigate to 'src' folder
- Run:
python -m PyInstaller pysoda/api.py --distpath pysodadist
Optional
- Edit spec file as needed (e.g. exclude PyQt5, tkinter). Especially, adding the following may be required on Windows and MAC:
hiddenimports=['pkg_resources.py2_warn']
- To generate exe, Run:
python -m PyInstaller --noconsole api.spec --distpath pysodadist
- for electron packaging, build and pysoda folder (with the .py files) could be deleted or ignored
You can then delete the "build" folder and the api.spec
file generated by PyInstaller before you move on since they are not necessary for packaging and distributing the app.
You can use the predefined build script to create a release for the app.
- Windows:
npm run build-win
- MAC:
npm run build-mac
- Linux:
npm run build-linux
If there are any errors, please check your build settings in the package.json. For more information regarding the build process and all the possible configuration options please refer to electron-builder documentation.
If you would like to fork this project and submit releases to your repository, please use the npm run deploy-<platform>
command. You will also need to change the repository options to point to your repository in the package.json
Organize and submit SPARC datasets with SODA
Connect your Pennsieve account with SODA
Upload a local dataset to Pennsieve
Connect your Airtable account with SODA
Create dataset_description.xlsx
Submit for pre-publishing review
Installing the Pennsieve Agent
Pennsieve Agent is already running
Sending log files to SODA Team
Issues regarding hidden files or folders
How to structure the submission metadata file
How to structure the dataset_description metadata file
How to structure the subjects metadata file
How to structure the samples metadata file