-
Notifications
You must be signed in to change notification settings - Fork 4
Packaging
Package Python code with PyInstaller
- Run anaconda prompt, activate the conda environment (if you haven't done that already)
- Navigate to 'src' folder
- Run:
python -m PyInstaller pysoda/api.py --distpath pysodadist
Optional
- Edit spec file as needed (e.g. exclude PyQt5, tkinter). Especially, adding the following may be required on Windows and MAC:
hiddenimports=['pkg_resources.py2_warn']
- To generate exe, Run:
python -m PyInstaller --noconsole api.spec --distpath pysodadist
- for electron packaging, build and pysoda folder (with the .py files) could be deleted or ignored
You can then delete the build
folder and the api.spec
file generated by PyInstaller
before you move on since they are not necessary for packaging and distributing the app.
You can use the predefined build script to create a release for the app.
- Windows:
npm run build-win
- MAC:
npm run build-mac
- Linux:
npm run build-linux
If there are any errors, please check your build settings in the package.json. For more information regarding the build process and all the possible configuration options please refer to electron-builder documentation.
If you would like to fork this project and submit releases to your repository, please use the npm run deploy-<platform>
command. You will also need to change the two repository options to point to your repository in your package.json
. You will need a Github Access Token to allow electron-builder to push to GitHub or any other repository. This access token must be in your environment when you run the npm script. On Linux and MacOS, you can set this variable directly in your .bashrc
or .zshrc
with an export command. For windows please refer to these instructions.
Organize and submit SPARC datasets with SODA
Connect your Pennsieve account with SODA
Upload a local dataset to Pennsieve
Connect your Airtable account with SODA
Create dataset_description.xlsx
Submit for pre-publishing review
Installing the Pennsieve Agent
Pennsieve Agent is already running
Sending log files to SODA Team
Issues regarding hidden files or folders
How to structure the submission metadata file
How to structure the dataset_description metadata file
How to structure the subjects metadata file
How to structure the samples metadata file