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Compatibility Tests

Compatibility Tests #1079

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Compatibility Tests

Compatibility Tests #1079

Triggered via schedule February 4, 2025 08:03
@atolopko-cziatolopko-czi
⁠ fd8b47b
main
Status Failure
Total duration 7m 18s
Artifacts –

compatibility_tests.yml

on: schedule
docker-build
1m 21s
docker-build
Matrix: matrix-compatibility-test
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30 errors and 1 warning
cxg:main os:macos-latest py:3.12 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /opt/homebrew. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:main os:macos-latest py:3.12 anndata:latest
Process completed with exit code 1.
cxg:main os:macos-latest py:3.11 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /opt/homebrew. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:main os:macos-latest py:3.11 anndata:latest
Process completed with exit code 1.
cxg:latest os:macos-latest py:3.11 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /opt/homebrew. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:latest os:macos-latest py:3.11 anndata:latest
Process completed with exit code 1.
cxg:latest os:macos-latest py:3.10 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /opt/homebrew. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:latest os:macos-latest py:3.10 anndata:latest
Process completed with exit code 1.
cxg:latest os:macos-latest py:3.12 anndata:==0.10.9
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /opt/homebrew. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:latest os:macos-latest py:3.12 anndata:==0.10.9
Process completed with exit code 1.
cxg:main os:macos-13 py:3.12 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /usr/local. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:main os:macos-13 py:3.12 anndata:latest
Process completed with exit code 1.
cxg:main os:macos-latest py:3.10 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /opt/homebrew. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:main os:macos-latest py:3.10 anndata:latest
Process completed with exit code 1.
cxg:main os:macos-13 py:3.11 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /usr/local. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:main os:macos-13 py:3.11 anndata:latest
Process completed with exit code 1.
cxg:latest os:macos-13 py:3.11 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /usr/local. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:latest os:macos-13 py:3.11 anndata:latest
Process completed with exit code 1.
cxg:latest os:macos-13 py:3.10 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /usr/local. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:latest os:macos-13 py:3.10 anndata:latest
Process completed with exit code 1.
cxg:main os:macos-13 py:3.10 anndata:latest
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /usr/local. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:main os:macos-13 py:3.10 anndata:latest
Process completed with exit code 1.
cxg:latest os:macos-13 py:3.12 anndata:==0.10.9
Cannot install pkg-config because conflicting formulae are installed. pkgconf: because both install `pkg.m4` file Please `brew unlink pkgconf` before continuing. Unlinking removes a formula's symlinks from /usr/local. You can link the formula again after the install finishes. You can `--force` this install, but the build may fail or cause obscure side effects in the resulting software.
cxg:latest os:macos-13 py:3.12 anndata:==0.10.9
Process completed with exit code 1.
cxg:latest os:ubuntu-latest py:3.11 anndata:latest
Process completed with exit code 2.
cxg:main os:ubuntu-latest py:3.11 anndata:latest
Process completed with exit code 2.
cxg:latest os:ubuntu-latest py:3.10 anndata:latest
Process completed with exit code 2.
cxg:main os:ubuntu-latest py:3.10 anndata:latest
Process completed with exit code 2.
cxg:latest os:ubuntu-latest py:3.12 anndata:==0.10.9
Process completed with exit code 2.
cxg:main os:ubuntu-latest py:3.12 anndata:latest
Process completed with exit code 2.
docker-build
The `python-version` input is not set. The version of Python currently in `PATH` will be used.