chanzuckerberg · justypist · Jan 20, 2025 · Jan 20, 2025 · Jan 20, 2025 · Jan 20, 2025
diff --git a/.dockerignore b/.dockerignore
@@ -1,5 +1,5 @@
 bin
 client
-dist
 docs
 server
+*.csv
diff --git a/.gitignore b/.gitignore
@@ -17,6 +17,7 @@ dist/
 # Environments
 venv*/
 cellxgene/
+.venv
 
 # client build
 server/common/web/static/*
@@ -57,3 +58,6 @@ ignoreE2E*
 
 # annotate subcmd
 .models_cache
+
+# auto generated csv
+*.csv
diff --git a/Dockerfile b/Dockerfile
@@ -1,11 +1,14 @@
-FROM ubuntu:bionic
+FROM python:3.12.8-bookworm
 
 ENV LC_ALL=C.UTF-8
 ENV LANG=C.UTF-8
 
-RUN apt-get update && \
-    apt-get install -y build-essential libxml2-dev python3-dev python3-pip zlib1g-dev python3-requests python3-aiohttp && \
-    python3 -m pip install --upgrade pip && \
-    pip3 install cellxgene
+COPY ./dist/cellxgene-1.3.0.tar.gz /tmp/cellxgene-1.3.0.tar.gz
+
+# RUN apt-get update && \
+#     apt-get install -y build-essential libxml2-dev python3-dev python3-pip zlib1g-dev && \
+#     pip3 install /tmp/cellxgene-1.3.0.tar.gz
+
+RUN pip3 install /tmp/cellxgene-1.3.0.tar.gz
 
 ENTRYPOINT ["cellxgene"]
diff --git a/client/favicon.png b/client/favicon.png
diff --git a/client/index.html b/client/index.html
@@ -3,7 +3,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1" />
-    <title>CELL&times;GENE | Annotate</title>
+    <title>Dandelion</title>
     <style>
       html,
       body,

diff --git a/client/index_template.html b/client/index_template.html
@@ -3,7 +3,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1" />
-    <title>CELL&times;GENE | Annotate</title>
+    <title>Dandelion</title>
     <style>
       html,
       body,
-Original file line number
+Diff line change
@@ -1,5 +1,5 @@
     bin
     client
-    dist
     docs
     server
+    *.csv