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Merge pull request #22232 from pavelToman/20250129114032_new_pr_paral…
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…lel-fastq-dump067

{bio}[gompi/2023a] parallel-fastq-dump v0.6.7
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boegel authored Jan 29, 2025
2 parents 80fb4d7 + aeaf783 commit ff9da05
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# Author: Pavel Grochal (INUITS)
# License: GPLv2

easyblock = 'PythonPackage'

name = 'parallel-fastq-dump'
version = '0.6.7'

homepage = 'https://github.com/rvalieris/parallel-fastq-dump'
description = "parallel fastq-dump wrapper"
docurls = ["https://github.com/rvalieris/parallel-fastq-dump"]

toolchain = {'name': 'gompi', 'version': '2023a'}

# https://github.com/rvalieris/parallel-fastq-dump/archive/
github_account = 'rvalieris'
source_urls = [GITHUB_SOURCE]
sources = ['%(version)s.tar.gz']
checksums = ['cb33ea0ed0b1123c100aee7b9ea60a3fc3fc81a3a46be5237c85ba56380617de']

dependencies = [
('Python', '3.11.3'),
('SRA-Toolkit', '3.0.10'),
]

download_dep_fail = True
use_pip = True

sanity_check_paths = {
'files': ['bin/parallel-fastq-dump'],
'dirs': ['lib/python%(pyshortver)s/site-packages'],
}

# This package doesn't produce importable module, only executable script.
options = {'modulename': False}

sanity_check_commands = ["parallel-fastq-dump --version"]

sanity_pip_check = True

moduleclass = 'bio'

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