Code

Product shape#101

Code

Merged

edoddridge merged 51 commits intoedoddridge:masteredoddridge/aronnax:masterfrom axch:product-shapeaxch/MIM:product-shapeCopy head branch name to clipboardApr 19, 2017

+921-824

Commits

Commits on Apr 17, 2017

• Start a utils module for stuff from the output preservation test that I want to reuse in the driver.

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• Draft end-to-end driver program, with enough room for flexible use and polite output.

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• Draft schema for generation of data files.

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• Draft dumping the parameter file.

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• Interpret existing compile and run conventions in the driver framework.

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• Draft reading input data from raw Fortran files.

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• Fiddles from trying to actually run the draft driver.

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• Do what it takes to permit programmatic generation of layer height (for now) data.

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• Do what it takes to allow a config file to specify the wetmask as "rectangular pool".

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• Add the u and v beta plane Coriolis components as generators.

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• More fiddles from trying to run the draft driver.

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• Format boolean values as Fortran expects, and write the names of the generated raw files, not their specs.

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• Force all the sections to be present, since Fortran looks for them.

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• It's spelled CONDITIONS, with two letters 'I'.

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• Oops, accidentally broke write_rectangular_pool.

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• Force blank file names to be written for the core's benefit even when no input data was specified.

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• Rewrite the reduced gravity benchmark to use the new driver instead of output_preservation_test.run_experiment.

  axch

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• Rewrite the 2-layer benchmark to use the new driver as well.

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• The benchmark script no longer depends on the test suite.

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Commits on Apr 18, 2017

• Apparently ConfigParser.getboolean doesn't understand Python booleans :(

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• Rewrite the profiling script in terms of the new driver instead of output_preservation_test.run_experiment.

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• Flush broken comment.

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• Rewrite test_gaussian_bump_red_grav to use the new driver. It passes, up to edoddridge#96.

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• Explicit variable name makes it a bit easier to add debug prints.

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• Port the beta plane bump test to the new driver.

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• Flush another mis-copied comment.

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• More useful debugging output for the agreement tests.

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• Don't need these test input generation helpers anymore.

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• Ignore generated configuration files.

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• Rewrite test_f_plane_red_grav in terms of the new driver.

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• Rewrite test_f_plane in terms of the new driver.

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• Port test_beta_plane_gyre_red_grav to the new driver.

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• Port test_beta_plane_gyre to new driver.

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• This helper code has been superseded by the new driver.

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• All of these writer helpers are subsumed by the new driver too.

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• Update documentation references to new input generators.

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• Rename "interpret_initial_heights" to the less awkward "depths"; match its config file name to its new Python name.

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• Try to guess type annotations for some input files, but I am not sure of the right values.

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• Stop working around edoddridge#96, and update known-good outputs.

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Commits on Apr 19, 2017

• Document the Aronnax driver functions.

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• Marginally better documentation of the idealized data generation pipeline.

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• Merge remote-tracking branch 'origin/master'

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• rename Coriolis field generators to include "f"

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• make Travis install package in such a way that the test suite works. This is a work around and needs a better long term fix.

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• change Coriolis function names in documentation too.

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• edit Coriolis function docstrings to say u or v location, rather than component - it is a scalar field, not a vector field

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• direcotry -> directly

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• put Coriolis functions in separate section from wetmask function

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• state which configuration files are automatically generated.

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• add "running Aronnax" section to docs and modify driver.simulate() docstring

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• rename coriolis functions in benchmark simulations

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