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Merge pull request #1184 from glotzerlab/release-3.0.0-beta.12
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Release v3.0.0 beta.12
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joaander authored Dec 15, 2021
2 parents f8b8989 + 7f12e1f commit b47d093
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Showing 11 changed files with 46 additions and 25 deletions.
2 changes: 1 addition & 1 deletion .bumpversion.cfg
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@@ -1,5 +1,5 @@
[bumpversion]
current_version = 3.0.0-beta.11
current_version = 3.0.0-beta.12
commit = False
tag = False
parse = ^(?P<major>0|[1-9]\d*)\.(?P<minor>0|[1-9]\d*)\.(?P<patch>0|[1-9]\d*)(?:-(?P<prerelease>(?:0|[1-9]\d*|\d*[a-zA-Z-][0-9a-zA-Z-]*))(?:\.(?P<number>0|[1-9]\d*|\d*[a-zA-Z-][0-9a-zA-Z-]*)))?$
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4 changes: 2 additions & 2 deletions .github/workflows/release.yml
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Expand Up @@ -67,7 +67,7 @@ jobs:
run: tar -cvzf ${name}-${tag}.tar.gz ${name}-${tag}

- name: Upload release files
uses: actions/upload-artifact@v2.2.4
uses: actions/upload-artifact@v2.3.0
with:
name: release
path: |
Expand All @@ -81,7 +81,7 @@ jobs:

steps:
- name: Download artifacts
uses: actions/download-artifact@v2.0.10
uses: actions/download-artifact@v2.1.0
with:
name: release

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4 changes: 2 additions & 2 deletions .github/workflows/templates/release.yml
Original file line number Diff line number Diff line change
Expand Up @@ -53,7 +53,7 @@ jobs:
run: tar -cvzf ${name}-${tag}.tar.gz ${name}-${tag}

- name: Upload release files
uses: actions/upload-artifact@v2.2.4
uses: actions/upload-artifact@v2.3.0
with:
name: release
path: |
Expand All @@ -67,7 +67,7 @@ jobs:

steps:
- name: Download artifacts
uses: actions/download-artifact@v2.0.10
uses: actions/download-artifact@v2.1.0
with:
name: release

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8 changes: 4 additions & 4 deletions .github/workflows/templates/test.yml
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Expand Up @@ -84,29 +84,29 @@ env:
# Upload the tarballs. Retain the file for a limited time in case developers need to download
# and run tests locally for further debugging.
- name: 'Upload build'
uses: actions/upload-artifact@v2.2.4
uses: actions/upload-artifact@v2.3.0
with:
name: build-${{ join(matrix.config, '_') }}-${{ github.sha }}
path: build.tar
retention-days: 7
- name: 'Upload install'
uses: actions/upload-artifact@v2.2.4
uses: actions/upload-artifact@v2.3.0
with:
name: install-${{ join(matrix.config, '_') }}-${{ github.sha }}
path: install.tar
retention-days: 7
<% endset %>
<% set download_build_steps %>
- name: Download build
uses: actions/download-artifact@v2.0.10
uses: actions/download-artifact@v2.1.0
with:
name: build-${{ join(matrix.config, '_') }}-${{ github.sha }}
- name: Untar build
run: << tar_command >> -xvf build.tar
<% endset %>
<% set download_install_steps %>
- name: Download install
uses: actions/download-artifact@v2.0.10
uses: actions/download-artifact@v2.1.0
with:
name: install-${{ join(matrix.config, '_') }}-${{ github.sha }}
- name: Untar install
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18 changes: 9 additions & 9 deletions .github/workflows/test.yml
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Expand Up @@ -100,13 +100,13 @@ jobs:
# Upload the tarballs. Retain the file for a limited time in case developers need to download
# and run tests locally for further debugging.
- name: 'Upload build'
uses: actions/upload-artifact@v2.2.4
uses: actions/upload-artifact@v2.3.0
with:
name: build-${{ join(matrix.config, '_') }}-${{ github.sha }}
path: build.tar
retention-days: 7
- name: 'Upload install'
uses: actions/upload-artifact@v2.2.4
uses: actions/upload-artifact@v2.3.0
with:
name: install-${{ join(matrix.config, '_') }}-${{ github.sha }}
path: install.tar
Expand All @@ -133,7 +133,7 @@ jobs:
run: rm -rf ./*

- name: Download install
uses: actions/download-artifact@v2.0.10
uses: actions/download-artifact@v2.1.0
with:
name: install-${{ join(matrix.config, '_') }}-${{ github.sha }}
- name: Untar install
Expand Down Expand Up @@ -176,7 +176,7 @@ jobs:
run: rm -rf ./*

- name: Download build
uses: actions/download-artifact@v2.0.10
uses: actions/download-artifact@v2.1.0
with:
name: build-${{ join(matrix.config, '_') }}-${{ github.sha }}
- name: Untar build
Expand Down Expand Up @@ -213,7 +213,7 @@ jobs:
run: rm -rf ./*

- name: Download install
uses: actions/download-artifact@v2.0.10
uses: actions/download-artifact@v2.1.0
with:
name: install-${{ join(matrix.config, '_') }}-${{ github.sha }}
- name: Untar install
Expand Down Expand Up @@ -289,13 +289,13 @@ jobs:
# Upload the tarballs. Retain the file for a limited time in case developers need to download
# and run tests locally for further debugging.
- name: 'Upload build'
uses: actions/upload-artifact@v2.2.4
uses: actions/upload-artifact@v2.3.0
with:
name: build-${{ join(matrix.config, '_') }}-${{ github.sha }}
path: build.tar
retention-days: 7
- name: 'Upload install'
uses: actions/upload-artifact@v2.2.4
uses: actions/upload-artifact@v2.3.0
with:
name: install-${{ join(matrix.config, '_') }}-${{ github.sha }}
path: install.tar
Expand Down Expand Up @@ -332,7 +332,7 @@ jobs:
run: rm -rf ./*

- name: Download install
uses: actions/download-artifact@v2.0.10
uses: actions/download-artifact@v2.1.0
with:
name: install-${{ join(matrix.config, '_') }}-${{ github.sha }}
- name: Untar install
Expand Down Expand Up @@ -385,7 +385,7 @@ jobs:
run: rm -rf ./*

- name: Download build
uses: actions/download-artifact@v2.0.10
uses: actions/download-artifact@v2.1.0
with:
name: build-${{ join(matrix.config, '_') }}-${{ github.sha }}
- name: Untar build
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21 changes: 21 additions & 0 deletions CHANGELOG.rst
Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,27 @@ Change Log
v3.x
----

v3.0.0-beta.12 (2021-12-14)
^^^^^^^^^^^^^^^^^^^^^^^^^^^

*Added*

* Support simulations with arbitrarily large or small scales (within the limits of the floating
point representation).

*Changed*

* Report full error details in the exception message.
* Improved documentation.
* [breaking]: ``buffer`` is now a required argument when constructing a neighbor list.
* [breaking]: ``force_tol``, ``angmom_tol``, and ``energy_tol`` are now required arguments to
``md.minimize.FIRE``

*Fixed*

* Allow neighbor lists to store more than ``2**32-1`` total neighbors.
* Return expected parameter values instead of ``NaN`` when potential parameters are set to 0.

v3.0.0-beta.11 (2021-11-18)
^^^^^^^^^^^^^^^^^^^^^^^^^^^

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2 changes: 1 addition & 1 deletion CMakeLists.txt
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Expand Up @@ -14,7 +14,7 @@ add_subdirectory (CMake)

################################
## Version information
set(HOOMD_VERSION_RAW "3.0.0-beta.11")
set(HOOMD_VERSION_RAW "3.0.0-beta.12")
string(REGEX MATCH "(.*)\\.(.*)\\.(.*)$" _hoomd_version_match ${HOOMD_VERSION_RAW})
set(HOOMD_VERSION_MAJOR ${CMAKE_MATCH_1})
set(HOOMD_VERSION_MINOR ${CMAKE_MATCH_2})
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4 changes: 2 additions & 2 deletions hoomd/hpmc/external/user.py
Original file line number Diff line number Diff line change
Expand Up @@ -60,9 +60,9 @@ class CPPExternalPotential(_HOOMDBaseObject):
Your code *must* return a value.
.. _VectorMath.h: https://github.com/glotzerlab/hoomd-blue/blob/\
v3.0.0-beta.11/hoomd/VectorMath.h
v3.0.0-beta.12/hoomd/VectorMath.h
.. _BoxDim.h: https://github.com/glotzerlab/hoomd-blue/blob/\
v3.0.0-beta.11/hoomd/BoxDim.h
v3.0.0-beta.12/hoomd/BoxDim.h
Example:
.. code-block:: python
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2 changes: 1 addition & 1 deletion hoomd/hpmc/pair/user.py
Original file line number Diff line number Diff line change
Expand Up @@ -68,7 +68,7 @@ class CPPPotentialBase(_HOOMDBaseObject):
HOOMD-blue source code.
.. _VectorMath.h: https://github.com/glotzerlab/hoomd-blue/blob/\
v3.0.0-beta.11/hoomd/VectorMath.h
v3.0.0-beta.12/hoomd/VectorMath.h
Note:
Your code *must* return a value.
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4 changes: 2 additions & 2 deletions sphinx-doc/conf.py
Original file line number Diff line number Diff line change
Expand Up @@ -51,8 +51,8 @@
copyright = '2009-2021 The Regents of the University of Michigan'
author = 'The Regents of the University of Michigan'

version = '3.0.0-beta.11'
release = '3.0.0-beta.11'
version = '3.0.0-beta.12'
release = '3.0.0-beta.12'

language = None

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