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Fix rseqc container repo - old image format on quay.io
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emi80 committed Jun 19, 2024
1 parent c79e661 commit 84e5f86
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion modules/inferExp/rseqc/main.nf
Original file line number Diff line number Diff line change
@@ -2,7 +2,7 @@ params.rseqcVersion = '2.6.4--py27hf8a1672_2'
params.ucscVersion = '447--h2a80c09_1'
params.gtfToGenePredContainer = "${params.containerRepo}/ucsc-gtftogenepred:${params.ucscVersion}"
params.genePredContainer = "${params.containerRepo}/ucsc-genepredtobed:${params.ucscVersion}"
params.rseqcContainer = "${params.containerRepo}/rseqc:${params.rseqcVersion}"
params.rseqcContainer = "public.ecr.aws/biocontainers/rseqc:${params.rseqcVersion}"
params.inferExpThreshold = '0.8'

process gtfToGenePred {

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