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feat: add the implementation of hvlc(hybrid vector logical clock) #20

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merged 1 commit into from
Dec 3, 2024

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@ai-chen2050 ai-chen2050 commented Dec 2, 2024

  • This Hybrid Vector Logical Clock (HVLC) crate implements a hybrid vector clock structure that combines physical timestamps with vector clock properties.
  • The implementation provides core functionalities like event ordering, clock merging, and base calculation, suitable for scenarios requiring distributed causality tracking.
  • It can be used to as the CRDTs(Conflict-free Replicated Data Type) algorithm in distributed scenarios for providing total ordering.

Summary by CodeRabbit

  • New Features

    • Introduced a new workspace member for the Hybrid Vector Logical Clock (HVLC) crate.
    • Added a detailed section in the README for the HVLC crate, outlining its functionalities and use cases.
    • Implemented the HVLCClock structure for managing event timestamps in distributed systems.
  • Bug Fixes

    • Enhanced error handling in the server's memory usage function and improved resource management in network tasks.
  • Documentation

    • Updated README files to include new crate information and functionality descriptions.
  • Tests

    • Added unit tests for the HVLCClock implementation to ensure functionality and correctness.

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coderabbitai bot commented Dec 2, 2024

Walkthrough

The changes in this pull request include modifications to the Cargo.toml files for the chronos and hvlc packages, adding a new workspace member and adjusting formatting. A new section for the hvlc crate has been added to the crates/README.md, detailing its functionality. The hlc module has been updated to implement comparison traits for the State struct, alongside a new test case. The hvlc crate introduces a new logical clock implementation with various methods for timestamp management. Additionally, the demos/test_vlc_net server has improved memory management and error handling.

Changes

File Change Summary
Cargo.toml Added "crates/hvlc" to [workspace] members, reformatted entry for "demos/test_vlc_net",.
crates/README.md Introduced a new section for the hvlc crate detailing its features and structure.
crates/hlc/src/lib.rs Added trait implementations for PartialEq, Eq, PartialOrd, and Ord for State<F>. Added a new test hlts_comparing.
crates/hvlc/Cargo.toml Created a new Cargo.toml for hvlc with dependencies including tokio, serde, and cryptographic libraries.
crates/hvlc/src/lib.rs Introduced HVLCClock struct and Clock trait with methods for managing timestamps and merging events.
demos/test_vlc_net/src/server.rs Updated sys_memory_usage for error handling and enhanced network_task for better memory management.

Possibly related PRs

  • feat: add the test_vlc_net submodule to demos #19: The changes in this PR also involve modifications to the Cargo.toml file, specifically adding new entries to the [workspace] members section, which is directly related to the changes made in the main PR regarding the addition of "crates/hvlc" to the workspace.

Suggested reviewers

  • fshif

🐰 In the code, I hop and play,
With clocks and crates, I find my way.
New members join the workspace cheer,
As memory checks keep troubles clear.
In Rust we trust, with traits so bright,
Together we code, from day to night! 🌟


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Actionable comments posted: 5

🧹 Outside diff range and nitpick comments (4)
crates/hvlc/src/lib.rs (2)

136-164: Re-evaluate timestamp comparison in PartialOrd implementation.

When both ge(self, other) and ge(other, self) are false (concurrent clocks), comparing timestamps may not reflect causal relationships accurately. Consider documenting this behavior or adjusting the logic to prevent unexpected ordering.


187-295: Enhance unit tests to cover edge cases and error handling.

The current tests check basic functionality. Consider adding tests for scenarios like integer overflows, error handling in serialization, and partial ordering cases to ensure comprehensive coverage.

Cargo.toml (1)

23-23: Maintain consistent formatting in workspace members list.

Adding the trailing comma after "demos/test_vlc_net", improves readability and consistency with the other list items.

crates/hlc/src/lib.rs (1)

187-195: Expand tests to verify comparison trait implementations.

The hlts_comparing test confirms that the State instances are correctly ordered. Consider additional tests for equality and ordering edge cases to ensure robustness.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Reviewing files that changed from the base of the PR and between b5f2ec1 and a364c19.

📒 Files selected for processing (6)
  • Cargo.toml (2 hunks)
  • crates/README.md (1 hunks)
  • crates/hlc/src/lib.rs (2 hunks)
  • crates/hvlc/Cargo.toml (1 hunks)
  • crates/hvlc/src/lib.rs (1 hunks)
  • demos/test_vlc_net/src/server.rs (1 hunks)
✅ Files skipped from review due to trivial changes (1)
  • crates/hvlc/Cargo.toml
🔇 Additional comments (4)
demos/test_vlc_net/src/server.rs (1)

Line range hint 497-527: Ensure consistent memory usage thresholds in network_task.

The logic for pausing and resuming the event trigger task uses different thresholds (sys_max_mem_usage and sys_min_mem_usage). Ensure that these thresholds are correctly set and documented to prevent unintended behavior.

Check the memory usage thresholds in the configuration:

✅ Verification successful

Memory thresholds are correctly configured and used consistently

The code shows a consistent and well-structured memory management system:

  1. The memory thresholds are properly ordered:

    • sys_disconnect_mem is hardcoded at 95.0% (highest threshold)
    • sys_max_mem_usage is set from config.max_sys_memory_percent (middle threshold)
    • sys_min_mem_usage is set from config.min_sys_memory_percent (lowest threshold)
  2. The thresholds are used logically in the code:

    • At 95% (sys_disconnect_mem): System disconnects network traffic
    • Above sys_max_mem_usage: Pauses event trigger task
    • Above sys_min_mem_usage: Logs current usage
    • Below sys_min_mem_usage: Resumes computation and recovers connections

The implementation ensures proper memory management with graduated responses as memory usage increases.

🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify that sys_max_mem_usage is greater than sys_min_mem_usage.

# Expected: sys_max_mem_usage > sys_min_mem_usage
grep -E 'sys_max_mem_usage|sys_min_mem_usage' configs/*.toml

Length of output: 112


Script:

#!/bin/bash
# Let's first find all configuration files and then search for memory-related settings
fd -e toml -x cat {} | grep -E "sys_|mem|memory"

# Also search for memory-related struct definitions and configurations in the code
rg -A 5 "struct.*Memory|memory.*config" 

Length of output: 463


Script:

#!/bin/bash
# Let's find all usages of MemoryWatcherConfig and its fields
ast-grep --pattern 'struct MemoryWatcherConfig { $$$ }'

# Also search for the initialization of these memory thresholds
rg -B 2 -A 2 "sys_(max|min|disconnect)_mem"

# Search for any memory-related configuration parsing
rg "MemoryWatcherConfig.*new|from" -A 5

Length of output: 65682


Script:

#!/bin/bash
# Let's find the memory configuration struct and its usage
ast-grep --pattern 'struct MemoryWatcherConfig { $$$ }'

# Search for memory threshold comparisons and their usage
rg "sys_(max|min|disconnect)_mem.*=|>|<" -B 2 -A 2

# Find where memory thresholds are initialized
rg "MemoryWatcherConfig.*new|=.*\{" -A 5

Length of output: 68409


Script:

#!/bin/bash
# Let's find where MemoryWatcherConfig is initialized and used
rg "MemoryWatcherConfig.*=.*\{|let.*mem.*=.*Memory" -B 2 -A 5

# Also search for the memory threshold comparisons in the server code
rg "sys_(max|min|disconnect)_mem" demos/test_vlc_net/src/server.rs -B 2 -A 2

Length of output: 2697

Cargo.toml (1)

12-12: Confirm addition of crates/hvlc to workspace members.

The new workspace member "crates/hvlc", is correctly added. Ensure that the path is valid and that the crate is properly configured.

crates/README.md (1)

18-28: Well-documented addition of the hvlc crate.

The description provides a clear overview of the hvlc crate's purpose and features, aiding in understanding its role within the project.

crates/hlc/src/lib.rs (1)

87-106: Implementing comparison traits for State<F> enhances functionality.

Adding PartialEq, Eq, PartialOrd, and Ord implementations allows State<F> instances to be directly compared, which can be useful in various contexts.

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the code review over, I've added a few suggestions

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Actionable comments posted: 0

🧹 Outside diff range and nitpick comments (4)
crates/README.md (1)

18-27: Documentation looks good with minor improvements needed.

The HVLC section provides clear and comprehensive documentation. However, there's a small typo in the CRDTs link text.

Apply this diff to fix the typo:

-It can be used to as the [CRDTs](https://crdt.tech/)(Conflict-free Replicated Data Type) algorithm in distributed scenarios for providing total ordering.
+It can be used as the [CRDTs](https://crdt.tech/) (Conflict-free Replicated Data Types) algorithm in distributed scenarios for providing total ordering.
crates/hvlc/src/lib.rs (2)

24-31: Consider adding documentation for timestamp field.

While the struct is well-documented with derive macros, the timestamp field lacks documentation explaining its purpose and unit (nanoseconds).

Add field-level documentation:

 pub struct HVLCClock {
     #[deref]
     pub inner: BTreeMap<KeyId, u64>,
+    /// Physical timestamp in nanoseconds since UNIX_EPOCH
     pub timestamp: u128,
 }

139-149: Consider using a constant for hash size.

The magic number 32 for the hash size could be replaced with a named constant for better maintainability.

Add a constant at the top of the file:

+/// Size of SHA256 hash in bytes
+const SHA256_HASH_SIZE: usize = 32;

-pub fn calculate_sha256(&self) -> [u8; 32] {
+pub fn calculate_sha256(&self) -> [u8; SHA256_HASH_SIZE] {
demos/test_vlc_net/src/server.rs (1)

Line range hint 96-105: Consider extracting timestamp update logic.

The timestamp update logic is duplicated between this code and the HVLC implementation. Consider extracting it into a shared utility function.

Create a utility function:

pub fn get_current_timestamp() -> u128 {
    match std::time::SystemTime::now().duration_since(std::time::UNIX_EPOCH) {
        Ok(duration) => duration.as_nanos(),
        Err(e) => {
            error!("SystemTime error: {:?}", e);
            0
        }
    }
}
📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Reviewing files that changed from the base of the PR and between a364c19 and 5d7b9f6.

📒 Files selected for processing (6)
  • Cargo.toml (2 hunks)
  • crates/README.md (1 hunks)
  • crates/hlc/src/lib.rs (2 hunks)
  • crates/hvlc/Cargo.toml (1 hunks)
  • crates/hvlc/src/lib.rs (1 hunks)
  • demos/test_vlc_net/src/server.rs (1 hunks)
🚧 Files skipped from review as they are similar to previous changes (3)
  • Cargo.toml
  • crates/hlc/src/lib.rs
  • crates/hvlc/Cargo.toml
🧰 Additional context used
📓 Learnings (2)
demos/test_vlc_net/src/server.rs (1)
Learnt from: ai-chen2050
PR: hetu-project/chronos#20
File: demos/test_vlc_net/src/server.rs:134-137
Timestamp: 2024-12-02T09:54:27.709Z
Learning: In the `sys_memory_usage` function in `demos/test_vlc_net/src/server.rs`, returning `100.0` when `total_memory` is zero is acceptable to stop the progress.
crates/hvlc/src/lib.rs (1)
Learnt from: ai-chen2050
PR: hetu-project/chronos#20
File: crates/hvlc/src/lib.rs:123-132
Timestamp: 2024-12-02T10:10:47.201Z
Learning: In the `calculate_sha256` method in `crates/hvlc/src/lib.rs`, serialization errors should cause an immediate panic rather than being handled gracefully.
🔇 Additional comments (4)
crates/hvlc/src/lib.rs (3)

7-19: LGTM! Clock trait and LamportClock implementation are well-designed.

The trait definition and implementation are clean and follow Rust best practices.


222-330: Test coverage looks comprehensive.

The test suite covers all major functionality including initialization, merging, updating, and comparison operations. Good job on the test coverage!


106-106: ⚠️ Potential issue

Potential integer overflow in entry increment.

The line *updated.inner.entry(id).or_default() += 1 could overflow without any checks.

Apply this diff to handle potential overflow:

-*updated.inner.entry(id).or_default() += 1;
+let entry = updated.inner.entry(id).or_default();
+*entry = entry.saturating_add(1);

Likely invalid or redundant comment.

demos/test_vlc_net/src/server.rs (1)

134-137: Memory handling looks good.

Based on the provided learnings, returning 100.0 when total memory is zero is the intended behavior to stop progress.

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👌

@ai-chen2050 ai-chen2050 merged commit 54e4caf into hetu-project:poc_1 Dec 3, 2024
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