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Releases: hubmapconsortium/ccf-validation-tools

2022-07-11

11 Jul 07:44
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Release Notes

Ontology release

Ontology Version
UBERON 2022-06-30
CL 2022-06-18

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain v1.1 2021-12-01
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01
Bone-Marrow v1.2 2022-05-06
Blood v1.2 2022-05-06
Brain v1.2 2022-05-06
Eye v1.1 2022-05-06
Fallopian_tube v1.1 2022-05-06
Heart v1.2 revise for Oct 1, 2022
Kidney v1.2 2022-05-06
Knee v1.1 05-06-2022
Large_intestine v1.2 2022-05-06
Liver v1.1 2022-05-06
Lung v1.2 2022-05-06
Lymph_node v1.2 2022-05-06
Lymph_vasculature v1.1 2022-05-06
Ovary v1.1 2022-05-06
Pancreas v1.1 2022-05-06
Placenta V1.0 5/6/22
Peripheral_nervous_system v1.1 revise for Oct 1, 2022
Prostate NA revise for Oct 1, 2022
Skin v1.2 2022-05-06
Small_intestine NA revise for October 1, 2022
Spleen v1.2 5//6/2022
Spinal_Cord v1.0 2021-12-01
Thymus v1.2 2022-05-06
Ureter NA NA
Urinary_bladder NA NA
Uterus v1.1 May 6, 2022
Blood_vasculature v1.2 2022-05-06

2022-07-04

04 Jul 07:36
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Release Notes

Ontology release

Ontology Version
UBERON 2022-05-17
CL 2022-02-16

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain v1.1 2021-12-01
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01
Bone-Marrow v1.2 2022-05-06
Blood v1.2 2022-05-06
Brain v1.2 2022-05-06
Eye v1.1 2022-05-06
Fallopian_tube v1.1 2022-05-06
Heart v1.2 revise for Oct 1, 2022
Kidney v1.2 2022-05-06
Knee v1.1 05-06-2022
Large_intestine v1.2 2022-05-06
Liver v1.1 2022-05-06
Lung v1.2 2022-05-06
Lymph_node v1.2 2022-05-06
Lymph_vasculature v1.1 2022-05-06
Ovary v1.1 2022-05-06
Pancreas v1.1 2022-05-06
Placenta V1.0 5/6/22
Peripheral_nervous_system v1.1 revise for Oct 1, 2022
Prostate NA revise for Oct 1, 2022
Skin v1.2 2022-05-06
Small_intestine NA revise for October 1, 2022
Spleen v1.2 5//6/2022
Spinal_Cord v1.0 2021-12-01
Thymus v1.2 2022-05-06
Ureter NA NA
Urinary_bladder NA NA
Uterus v1.1 May 6, 2022
Blood_vasculature v1.2 2022-05-06

2022-06-27

27 Jun 17:33
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Release Notes

Ontology release

Ontology Version
UBERON 2022-05-17
CL 2022-02-16

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain v1.1 2021-12-01
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01
Bone-Marrow v1.2 2022-05-06
Blood v1.2 2022-05-06
Brain v1.2 2022-05-06
Eye v1.1 2022-05-06
Fallopian_tube v1.1 2022-05-06
Heart v1.2 revise for Oct 1, 2022
Kidney v1.2 2022-05-06
Knee v1.1 05-06-2022
Large_intestine v1.2 2022-05-06
Liver v1.1 2022-05-06
Lung v1.2 2022-05-06
Lymph_node v1.2 2022-05-06
Lymph_vasculature v1.1 2022-05-06
Ovary v1.1 2022-05-06
Pancreas v1.1 2022-05-06
Placenta V1.0 5/6/22
Peripheral_nervous_system v1.1 revise for Oct 1, 2022
Prostate NA revise for Oct 1, 2022
Skin v1.2 2022-05-06
Small_intestine NA revise for October 1, 2022
Spleen v1.2 5//6/2022
Spinal_Cord v1.0 2021-12-01
Thymus v1.2 2022-05-06
Ureter NA NA
Urinary_bladder NA NA
Uterus v1.1 May 6, 2022
Blood_vasculature v1.2 2022-05-06

2022-06-20

20 Jun 07:37
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Release Notes

Ontology release

Ontology Version
CL 2022-02-16
UBERON 2022-05-17

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain v1.1 2021-12-01
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01
Bone-Marrow v1.2 2022-05-06
Blood v1.2 2022-05-06
Brain v1.2 2022-05-06
Eye v1.1 2022-05-06
Fallopian_tube v1.1 2022-05-06
Heart v1.2 revise for Oct 1, 2022
Kidney v1.2 2022-05-06
Knee v1.1 05-06-2022
Large_intestine v1.2 2022-05-06
Liver v1.1 2022-05-06
Lung v1.2 2022-05-06
Lymph_node v1.2 2022-05-06
Lymph_vasculature v1.1 2022-05-06
Ovary v1.1 2022-05-06
Pancreas v1.1 2022-05-06
Placenta V1.0 5/6/22
Peripheral_nervous_system v1.1 revise for Oct 1, 2022
Prostate NA revise for Oct 1, 2022
Skin v1.2 2022-05-06
Small_intestine NA revise for October 1, 2022
Spleen v1.2 5//6/2022
Spinal_Cord v1.0 2021-12-01
Thymus v1.2 2022-05-06
Ureter NA NA
Urinary_bladder NA NA
Uterus v1.1 May 6, 2022
Blood_vasculature v1.2 2022-05-06

2022-06-13

13 Jun 12:45
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Release Notes

Ontology release

Ontology Version
UBERON 2022-05-17
CL 2022-02-16

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain v1.1 2021-12-01
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01
Bone-Marrow v1.2 2022-05-06
Blood v1.2 2022-05-06
Brain v1.2 2022-05-06
Eye v1.1 2022-05-06
Fallopian_tube v1.1 2022-05-06
Heart v1.2 revise for Oct 1, 2022
Kidney v1.2 2022-05-06
Knee NA revise for October 1, 2022
Large_intestine v1.2 2022-05-06
Liver v1.1 2022-05-06
Lung v1.2 2022-05-06
Lymph_node v1.2 2022-05-06
Lymph_vasculature v1.1 2022-05-06
Ovary v1.1 2022-05-06
Pancreas v1.1 2022-05-06
Placenta V1.0 5/6/22
Peripheral_nervous_system v1.1 revise for Oct 1, 2022
Prostate NA revise for Oct 1, 2022
Skin v1.2 2022-05-06
Small_intestine NA revise for October 1, 2022
Spleen v1.2 5//6/2022
Spinal_Cord v1.0 2021-12-01
Thymus v1.2 2022-05-06
Ureter NA NA
Urinary_bladder NA NA
Uterus v1.1 May 6, 2022
Blood_vasculature v1.2 2022-05-06

2022-06-06

06 Jun 12:46
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Release Notes

Ontology release

Ontology Version
UBERON 2022-05-17
CL 2022-02-16

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain v1.1 2021-12-01
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01
Bone-Marrow v1.2 2022-05-06
Blood v1.2 2022-05-06
Brain v1.2 2022-05-06
Eye v1.1 2022-05-06
Fallopian_tube v1.1 2022-05-06
Heart v1.2 revise for Oct 1, 2022
Kidney v1.2 2022-05-06
Knee NA revise for October 1, 2022
Large_intestine NA NA
Liver v1.1 2022-05-06
Lung v1.2 2022-05-06
Lymph_node v1.2 2022-05-06
Lymph_vasculature v1.1 2022-05-06
Ovary v1.1 2022-05-06
Pancreas v1.1 2022-05-06
Placenta V1.0 5/6/22
Peripheral_nervous_system v1.1 revise for Oct 1, 2022
Prostate NA revise for Oct 1, 2022
Skin v1.2 2022-05-06
Small_intestine NA revise for October 1, 2022
Spleen v1.2 5//6/2022
Spinal_Cord v1.0 2021-12-01
Thymus v1.2 2022-05-06
Ureter NA NA
Urinary_bladder NA NA
Uterus v1.1 May 6, 2022
Blood_vasculature v1.2 2022-05-06

2022-05-31

31 May 09:36
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Release Notes

Ontology release

Ontology Version
UBERON 2022-05-17
CL 2022-02-16

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain v1.1 2021-12-01
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01
Bone-Marrow NA NA
Blood v1.2 2022-04-01
Brain v1.2 May 6, 2022
Eye NA NA
Fallopian_tube v1.1 2022-03-30
Heart NA NA
Kidney v1.2 2022-05-06
Knee NA NA
Large_intestine NA NA
Liver NA NA
Lung NA 4-19-2022 In Progress moving author formatted over to ASCT+B table format--Ellen
Lymph_node NA NA
Lymph_vasculature v1.1 2022-05-06
Ovary v1.1 2022-03-30
Pancreas NA NA
Placenta NA NA
Peripheral_nervous_system NA NA
Prostate NA NA
Skin NA NA
Small_intestine NA NA
Spleen NA NA
Spinal_Cord v1.0 2021-12-01
Thymus NA NA
Ureter NA NA
Urinary_bladder NA NA
Uterus v1.1 May 6, 2022
Blood_vasculature v1.2 2022-03-31

2022-05-25

25 May 09:38
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Release Notes

Ontology release

Ontology Version
UBERON 2022-05-17
CL 2022-02-16

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain 12/1/2021 NA
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01
Bone-Marrow NA NA
Blood NA NA
Brain NA NA
Eye NA NA
Fallopian_tube NA NA
Heart NA NA
Kidney doi: https://doi.org/10.1101/2021.07.28.454201; DOI: 10.1038/s41467-019-10861-2; DOI: 10.1172/jci.insight.133267; DOI: 10.1038/s41586-020-2941-1; DOI: 10.1016/j.devcel.2019.10.005; DOI: 10.1073/pnas.2005477117; DOI: 10.1681/ASN.2020010071; DOI: 10.1126/science.aat1699; DOI: 10.3389/fimmu.2019.02035; DOI: 10.1126/science.aat5031; DOI: 10.1084/jem.20030323; DOI: 10.1016/j.exphem.2016.10.008 NA
Knee NA NA
Large_intestine NA NA
Liver NA NA
Lung NA NA
Lymph_node NA NA
Lymph_vasculature NA NA
Ovary NA NA
Pancreas NA NA
Placenta NA NA
Peripheral_nervous_system NA NA
Prostate NA NA
Skin NA NA
Small_intestine NA NA
Spleen NA NA
Spinal_Cord v1.0 2021-12-01
Thymus NA NA
Ureter NA NA
Urinary_bladder NA NA
Uterus NA NA
Blood_vasculature NA NA

2022-05-09

09 May 07:37
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Release Notes

Ontology release

Ontology Version
CL 2022-02-16
UBERON 2022-04-18

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain 12/1/2021 NA
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01
Bone-Marrow NA NA
Blood NA NA
Brain NA NA
Eye NA NA
Fallopian_tube NA NA
Heart NA NA
Kidney NA NA
Knee NA NA
Large_intestine NA NA
Liver NA NA
Lung NA NA
Lymph_node NA NA
Lymph_vasculature 3/31/2022 NA
Ovary NA NA
Pancreas NA NA
Placenta NA NA
Peripheral_nervous_system NA NA
Prostate NA NA
Skin NA NA
Small_intestine NA NA
Spleen NA NA
Spinal_Cord v1.0 2021-12-01
Thymus NA NA
Ureter NA NA
Urinary_bladder NA NA
Uterus NA NA
Blood_vasculature NA NA

2022-05-02

02 May 08:05
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Release Notes

Ontology release

Ontology Version
UBERON 2022-04-05
CL 2022-02-16

ASCT+b Tables

Organ Version Date
Bone-Marrow v1.1 2021-12-01
Blood v1.1 2021-12-01
Brain v1.1 2021-12-01
Eye v1.0 2021-12-01
Fallopian_tube v1.0 2021-12-01
Heart v1.1 2021-12-01
Kidney v1.1 2021-12-01
Knee v1.0 2021-12-01
Large_intestine v1.1 2021-12-01
Liver v1.0 2021-12-01
Lung v1.1 2021-12-01
Lymph_node v1.1 2021-12-01
Lymph_vasculature v1.0 2021-12-01
Ovary v1.0 2021-12-01
Pancreas v1.0 2021-12-01
Peripheral_nervous_system v1.0 2021-12-01
Prostate v1.0 2021-12-01
Skin v1.1 2021-12-01
Small_intestine v1.0 2021-12-01
Spleen v1.1 2021-12-01
Thymus v1.1 2021-12-01
Ureter v1.0 2021-12-01
Urinary_bladder v1.0 2021-12-01
Uterus v1.0 2021-12-01
Blood_vasculature v1.1 2021-12-01