Merge branch 'dev-precompile' into dev-JAWS_hack

Dockerfile

@@ -5,7 +5,8 @@ MAINTAINER KBase Developer
 # Insert apt-get instructions here to install
 # any required dependencies for your module.
 
-RUN apt update && apt install -y  g++ nano tree
+# libz is for Minimap2 in Quast
+RUN apt update && apt install -y  g++ nano tree wget libz-dev
 
 RUN python -m pip install --upgrade pip \
     && pip install \
@@ -18,6 +19,16 @@ RUN python -m pip install --upgrade pip \
 
 # Genemark is not open source for non-academic use, and so can't be used in KBase
 
+# Precompile dependencies vs compiling at first use
+# In particular, this allows the container to run @ NERSC
+RUN mkdir /quasttemp \
+    && cd /quasttemp \
+    && wget quast.sf.net/test_data.tar.gz \
+    && tar xzf test_data.tar.gz \
+    && quast.py --test --debug \
+    && cd - \
+    && rm -r /quasttemp
+
 # -----------------------------------------
 
 COPY ./ /kb/module