remove mamba from build script

macs3-project · Feb 21, 2025 · 463ff2a · 463ff2a
1 parent 8a833cf
commit 463ff2a
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Showing 2 changed files with 7 additions and 9 deletions.
diff --git a/.github/workflows/publish-to-anaconda.yml b/.github/workflows/publish-to-anaconda.yml
@@ -13,7 +13,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy: 
       matrix: 
-        python-version: ['3.12']
+        python-version: ['3.13']
         arch: ['x64']
     name: Build conda package in x64 under Python ${{ matrix.python-version }}
     steps:
@@ -39,10 +39,8 @@ jobs:
         # Useful for debugging any issues with conda
         conda info -a
         # configure the channels
-        conda config --add channels defaults
         conda config --add channels conda-forge
         conda config --add channels macs3
-        conda install -q mamba -c conda-forge
     - name: Build conda package
       run: |
         mkdir bld-dir
@@ -52,7 +50,7 @@ jobs:
         # Now add this folder as a highest priority channel
         conda config --add channels "file://`pwd`/bld-dir"
         # install MACS3 from local repo
-        mamba create -q -n MACS3 macs3
+        conda create -q -n MACS3 macs3
         # Activate this environment
         source /usr/share/miniconda/etc/profile.d/conda.sh
         conda activate MACS3
@@ -71,7 +69,7 @@ jobs:
       env:
         ANACONDA_API_TOKEN: ${{ secrets.ANACONDA_TOKEN }}
       run: |
-        mamba install anaconda-client
+        conda install anaconda-client
         anaconda upload bld-dir/**/macs3-*.tar.bz2
 
 
diff --git a/conda/macs3/meta.yaml b/conda/macs3/meta.yaml
@@ -1,5 +1,5 @@
 {% set name = "macs3" %}
-{% set version = "3.0.2" %}
+{% set version = "3.0.3" %}
 
 package:
   name: "{{ name|lower }}"
@@ -17,7 +17,7 @@ requirements:
   build:
     - {{ compiler('c') }}
     - zlib
-    - python >=3.11
+    - python >=3.13
     - numpy >=1.25
     - scipy >=1.12
     - Cython ~=3.0
@@ -26,7 +26,7 @@ requirements:
     - hmmlearn >=0.3.2
     - scikit-learn >=1.3
   host:
-    - python >=3.11
+    - python >=3.13
     - zlib
     - numpy >=1.25
     - scipy >=1.12
@@ -35,7 +35,7 @@ requirements:
     - scikit-learn >=1.3
     - cykhash >=2.0,<3.0
   run:
-    - python >=3.11
+    - python >=3.13
     - numpy >=1.25
     - scipy >=1.12
     - hmmlearn >=0.3.2