Implement diplotype clustering, refactor haplotype clustering, and fi… #15

	name: tagged_docs
	on:
	push:
	tags:
	- 'v[0-9]+.[0-9]+.[0-9]+'
	jobs:
	tagged_docs:
	runs-on: ubuntu-latest
	permissions:
	contents: write
	steps:
	# Remove the prefix "refs/*/" from $GITHUB_REF to get the tag
	# Add var assignment to the $GITHUB_ENV file, so VERSION_TAG is available in later steps
	- name: Set VERSION_TAG env var ⚙️
	run: echo "VERSION_TAG=${GITHUB_REF#refs/*/}" >> $GITHUB_ENV

	- name: Eyeball VERSION_TAG env var 👀
	run: \|
	echo "$VERSION_TAG"
	echo ${{ env.VERSION_TAG }}

	- name: Check out VERSION_TAG 🛒
	uses: actions/checkout@v3
	with:
	ref: ${{ env.VERSION_TAG }}

	- name: Set up Python 🐍
	uses: actions/setup-python@v4
	with:
	python-version: '3.11'

	- name: Install poetry
	run: pipx install poetry==1.7.1

	- name: Eyeball native environment 👀
	run: python --version ; pip --version ; poetry --version ; pwd ; ls -la

	- name: Install package dependencies 📜
	run: poetry install

	- name: Build HTML 🏗️
	run: poetry run sphinx-build -b html docs/source docs/build/html

	- name: Deploy HTML to GitHub Pages 🚀
	uses: peaceiris/actions-gh-pages@v3.9.3
	with:
	publish_branch: gh-pages
	github_token: ${{ secrets.GITHUB_TOKEN }}
	publish_dir: ./docs/build/html
	destination_dir: ${{ env.VERSION_TAG }}

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