InterProScan

InterProScan provides functional analysis of proteins by classifying them into families and predicting domains and important sites ¹.

To classify proteins in this way, InterProScan uses predictive models, known as signatures, provided by several different databases (referred to as member databases) that make up the InterPro consortium.

It combines protein signatures from these member databases into a single searchable resource, capitalising on their individual strengths to produce a powerful integrated database and diagnostic tool.

How to Access

Click Here: console.latch.bio/explore/67031/info

Requirements to Run

1. Your Email Address
2. A concatenated fasta file containing all of your protein sequences.

Footnotes

1. Blum M, Chang H, Chuguransky S, Grego T, Kandasaamy S, Mitchell A, Nuka G, Paysan-Lafosse T, Qureshi M, Raj S, RichardsonL, Salazar GA, Williams L, Bork P, Bridge A, Gough J, Haft DH, Letunic I, Marchler-Bauer A, Mi H, Natale DA, Necci M, Orengo CA, Pandurangan AP, Rivoire C, Sigrist CJA, Sillitoe I, Thanki N, Thomas PD, Tosatto SCE, Wu CH, Bateman A and Finn RD – The InterPro protein families and domains database: 20 years on. Nucleic Acids Research, Nov 2020, https://doi.org/10.1093/nar/gkaa977 ↩