Update dosdp patterns file

obophenotype · Feb 12, 2025 · b8bc198 · b8bc198
1 parent 53e6945
commit b8bc198
Showing 1 changed file with 19 additions and 7 deletions.
diff --git a/src/patterns/definitions.owl b/src/patterns/definitions.owl
@@ -12262,6 +12262,7 @@ Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2045555>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2045556>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2045557>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2045558>))
+Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2045559>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2050001>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2050002>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2050003>))
@@ -59399,11 +59400,12 @@ AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#has
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_1000109> "anatomical pigmentation")
 EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_1000109> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0002247> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0000061>)))
 
-# Class: <http://purl.obolibrary.org/obo/OBA_1000110> (bone density)
+# Class: <http://purl.obolibrary.org/obo/OBA_1000110> (bone tissue density)
 
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/OBA_1000110> "The mass density of a bone tissue.")
+AnnotationAssertion(<http://purl.org/dc/terms/contributor> <http://purl.obolibrary.org/obo/OBA_1000110> "https://orcid.org/0000-0001-8314-2140")
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute") <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_1000110> "mass density of bone tissue")
-AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_1000110> "bone density")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_1000110> "bone tissue density")
 EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_1000110> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0001019> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0002481>)))
 
 # Class: <http://purl.obolibrary.org/obo/OBA_1000111> (adrenal gland size)
@@ -109477,6 +109479,14 @@ AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#has
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_2045558> "heel bone density")
 EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_2045558> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0001019> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0001450>)))
 
+# Class: <http://purl.obolibrary.org/obo/OBA_2045559> (bone density)
+
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/OBA_2045559> "The mass density of a bone element.")
+AnnotationAssertion(<http://purl.org/dc/terms/contributor> <http://purl.obolibrary.org/obo/OBA_2045559> "https://orcid.org/0000-0001-8314-2140")
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute") <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_2045559> "mass density of bone element")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_2045559> "bone density")
+EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_2045559> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0001019> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0001474>)))
+
 # Class: <http://purl.obolibrary.org/obo/OBA_2050001> (ascending aorta diameter)
 
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/OBA_2050001> "The diameter of a ascending aorta.")
@@ -171070,12 +171080,14 @@ AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#has
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_VT0005006> "osteoblast physiology trait")
 EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_VT0005006> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0001509> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/CL_0000062>)))
 
-# Class: <http://purl.obolibrary.org/obo/OBA_VT0005007> (bone mineral mass)
+# Class: <http://purl.obolibrary.org/obo/OBA_VT0005007> (bone mineral amount)
 
-AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/OBA_VT0005007> "The mass density of a bone element.")
-AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute") <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_VT0005007> "mass density of bone element")
-AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_VT0005007> "bone mineral mass")
-EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_VT0005007> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0001019> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0001474>)))
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute_location") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/OBA_VT0005007> "The amount of a mineral when measured in bone element.")
+AnnotationAssertion(<http://purl.org/dc/terms/contributor> <http://purl.obolibrary.org/obo/OBA_VT0005007> "https://orcid.org/0000-0001-8314-2140")
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute_location") <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_VT0005007> "bone element mineral amount")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_VT0005007> "bone mineral mass")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_VT0005007> "bone mineral amount")
+EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_VT0005007> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000070> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_46662> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0001474>)))))
 
 # Class: <http://purl.obolibrary.org/obo/OBA_VT0005008> (osteoblast development trait)