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    15 repositories

    • ude-regularization

      Public
      UDE Regularization Paper
      Julia
      •
      MIT License
      •0•2•0•0•Updated Jan 28, 2025Jan 28, 2025

    • InflammationODE

      Public
      MATLAB implementation of model code
      MATLAB
      •
      Other
      •1•1•0•0•Updated Jan 28, 2025Jan 28, 2025

    • conditional-ude

      Public
      Repository accompanying the manuscript on conditional universal differential equations
      Julia
      •
      Apache License 2.0
      •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

    • .github

      Public
      0•0•0•0•Updated Nov 8, 2024Nov 8, 2024

    • 8BB020_Intro-machine-learning

      Public
      Jupyter Notebook
      •
      MIT License
      •0•2•0•0•Updated Oct 25, 2024Oct 25, 2024

    • edes_model_sbml

      Public
      SBML version of EDES v1.0
      Apache License 2.0
      •0•0•0•0•Updated Jul 12, 2024Jul 12, 2024

    • juliacon-2024

      Public
      Julia for Systems Biology Workshop @JuliaCon 2024
      Julia
      •
      MIT License
      •2•8•0•0•Updated Jul 8, 2024Jul 8, 2024

    • mixed_meal_model_sbml

      Public
      Codebase for building the SBML version of the MixedMealModel
      Python
      •
      Apache License 2.0
      •0•1•2•0•Updated Jun 12, 2024Jun 12, 2024

    • Julia-sysbio-workshop

      Public
      Workshop code for the Julia for Systems Biology Workshop
      Jupyter Notebook
      •
      MIT License
      •1•1•0•0•Updated Jun 12, 2024Jun 12, 2024

    • 8cc00

      Public
      GitHub Lecture 8CC00 2024
      Python
      •
      Apache License 2.0
      •39•0•0•0•Updated May 13, 2024May 13, 2024

    • AutumnSchool2023

      Public
      Course material for the autumn school in scienfic machine learning 2023
      Julia
      •3•0•0•0•Updated Oct 16, 2023Oct 16, 2023

    • Mixed_Meal_Model

      Public
      Code to implement and parameterise the Mixed Meal Model
      MATLAB
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated May 22, 2023May 22, 2023

    • GSMM-distance

      Public
      Distance metrics for Genome-scale Metabolic Models
      Python
      •2•1•0•0•Updated May 10, 2019May 10, 2019

    • glutamine

      Public
      Metabolic tracer kinetics in Matlab - Identification of whole-body glutamine kinetics
      0•0•0•0•Updated May 10, 2019May 10, 2019

    • tissuespecific

      Public
      This repo contains functions to create and analyze tissue specific genome-scale models from gene expression data (GEO)
      Python
      •1•0•0•0•Updated Aug 8, 2018Aug 8, 2018