Still working on github actions to deploy #131
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| on: | |
| push: | |
| branches: | |
| - main | |
| name: renderbook | |
| jobs: | |
| bookdown: | |
| name: Render-Book | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v2 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| - name: Install pandoc | |
| run: | | |
| brew install pandoc | |
| - name: Cache Renv packages | |
| uses: actions/cache@v2 | |
| with: | |
| path: $HOME/.local/share/renv | |
| key: r-${{ hashFiles('renv.lock') }} | |
| restore-keys: r- | |
| - name: Cache bookdown results | |
| uses: actions/cache@v2 | |
| with: | |
| path: _bookdown_files | |
| key: bookdown-${{ hashFiles('**/*Rmd') }} | |
| restore-keys: bookdown- | |
| - name: "[Custom block] [Linux] Install spatial libraries" | |
| if: runner.os == 'Linux' | |
| run: sudo apt-get install libgdal-dev libproj-dev libgeos-dev libudunits2-dev | |
| # - name: "[Custom block] [macOS] Install spatial libraries" | |
| # if: runner.os == 'macOS' | |
| # run: | | |
| # # conflicts with gfortran from r-lib/actions when linking gcc | |
| # rm '/usr/local/bin/gfortran' | |
| # brew install pkg-config gdal proj geos | |
| - name: Install packages | |
| # The order of running the packages matters. For instance, placing `remotes` after `install_github` will lead to an error | |
| run: | | |
| R -e 'install.packages("bookdown")' | |
| R -e 'install.packages("curl")' | |
| R -e 'install.packages("deldir")' | |
| R -e 'install.packages("cartogram")' | |
| R -e 'install.packages("crosstalk")' | |
| R -e 'install.packages("geosphere")' | |
| R -e 'install.packages("ggmap")' | |
| R -e 'install.packages("gh")' | |
| R -e 'install.packages("gridExtra")' | |
| R -e 'install.packages("gstat")' | |
| R -e 'install.packages("kableExtra")' | |
| R -e 'install.packages("leaflet")' | |
| R -e 'install.packages("leaflet.extras")' | |
| R -e 'install.packages("maptools")' | |
| R -e 'install.packages("nngeo")' | |
| R -e 'install.packages("plotly")' | |
| R -e 'install.packages("readr")' | |
| R -e 'install.packages("remotes")' | |
| R -e 'install.packages("renv")' | |
| R -e 'install.packages("rgdal")' | |
| R -e 'install.packages("patchwork")' | |
| R -e 'install.packages("sf")' | |
| R -e 'install.packages("spatialreg")' | |
| R -e 'install.packages("spatstat")' | |
| R -e 'install.packages("spdep")' | |
| R -e 'install.packages("spgwr")' | |
| R -e 'install.packages("stars")' | |
| R -e 'install.packages("tidyverse")' | |
| R -e 'install.packages("vcdExtra")' | |
| R -e 'renv::restore()' | |
| R -e 'remotes::install_github("paezha/isdas")' | |
| - name: Build site | |
| run: Rscript -e 'bookdown::render_book("index.Rmd", quiet = TRUE)' | |
| - uses: actions/upload-artifact@v1 | |
| with: | |
| name: _book | |
| path: _book/ | |
| # Need to first create an empty gh-pages branch | |
| # This workflow is partially based on this: https://medium.com/@delucmat/how-to-publish-bookdown-projects-with-github-actions-on-github-pages-6e6aecc7331e | |
| # But it uses a newer version of Cecilapp/GitHub-Pages-deploy | |
| # # Make a new branch with no parents and disconnected from all other branches | |
| # git checkout --orphan gh-pages | |
| # # Remove all files from the working tree | |
| # git rm -rf . | |
| # # Make an empty commit | |
| # git commit --allow-empty -m 'Initial gh-pages commit' | |
| # # Pushing to remote will create gh-pages branch on the remote repo | |
| # git push origin gh-pages | |
| # git checkout main | |
| checkout-and-deploy: | |
| runs-on: ubuntu-latest | |
| needs: bookdown | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@master | |
| - name: Download artifact | |
| uses: actions/download-artifact@v1.0.0 | |
| with: | |
| # Artifact name | |
| name: _book # optional | |
| # Destination path | |
| path: _book # optional | |
| - name: GH Pages deploy | |
| uses: Cecilapp/GitHub-Pages-deploy@3.2.0 | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| email: paezha@gmail.com | |
| build_dir: _book # "_site/" by default | |
| # on: | |
| # push: | |
| # branches: | |
| # - main | |
| # - master | |
| # | |
| # name: bookdown | |
| # | |
| # jobs: | |
| # build: | |
| # runs-on: macOS-latest | |
| # env: | |
| # GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| # steps: | |
| # - name: Checkout repo | |
| # uses: actions/checkout@v2 | |
| # | |
| # - name: Setup R | |
| # uses: r-lib/actions/setup-r@v1 | |
| # | |
| # - name: Install pandoc | |
| # run: | | |
| # brew install pandoc | |
| # | |
| # - name: Cache Renv packages | |
| # uses: actions/cache@v2 | |
| # with: | |
| # path: $HOME/.local/share/renv | |
| # key: r-${{ hashFiles('renv.lock') }} | |
| # restore-keys: r- | |
| # | |
| # - name: Cache bookdown results | |
| # uses: actions/cache@v2 | |
| # with: | |
| # path: _bookdown_files | |
| # key: bookdown-${{ hashFiles('**/*Rmd') }} | |
| # restore-keys: bookdown- | |
| # | |
| # - name: "[Custom block] [Linux] Install spatial libraries" | |
| # if: runner.os == 'Linux' | |
| # run: sudo apt-get install libgdal-dev libproj-dev libgeos-dev libudunits2-dev | |
| # | |
| # - name: "[Custom block] [macOS] Install spatial libraries" | |
| # if: runner.os == 'macOS' | |
| # run: | | |
| # # conflicts with gfortran from r-lib/actions when linking gcc | |
| # rm '/usr/local/bin/gfortran' | |
| # brew install pkg-config gdal proj geos | |
| # | |
| # - name: Install packages | |
| # # The order of running the packages matters. For instance, placing `remotes` after `install_github` will lead to an error | |
| # | |
| # run: | | |
| # | |
| # R -e 'install.packages("bookdown")' | |
| # R -e 'install.packages("curl")' | |
| # R -e 'install.packages("deldir")' | |
| # R -e 'install.packages("cartogram")' | |
| # R -e 'install.packages("crosstalk")' | |
| # R -e 'install.packages("geosphere")' | |
| # R -e 'install.packages("ggmap")' | |
| # R -e 'install.packages("gh")' | |
| # R -e 'install.packages("gridExtra")' | |
| # R -e 'install.packages("gstat")' | |
| # R -e 'install.packages("kableExtra")' | |
| # R -e 'install.packages("leaflet")' | |
| # R -e 'install.packages("leaflet.extras")' | |
| # R -e 'install.packages("maptools")' | |
| # R -e 'install.packages("plotly")' | |
| # R -e 'install.packages("readr")' | |
| # R -e 'install.packages("remotes")' | |
| # R -e 'install.packages("renv")' | |
| # R -e 'install.packages("rgdal")' | |
| # R -e 'install.packages("patchwork")' | |
| # R -e 'install.packages("sf")' | |
| # R -e 'install.packages("spatialreg")' | |
| # R -e 'install.packages("spatstat")' | |
| # R -e 'install.packages("spdep")' | |
| # R -e 'install.packages("spgwr")' | |
| # R -e 'install.packages("stars")' | |
| # R -e 'install.packages("tidyverse")' | |
| # R -e 'install.packages("vcdExtra")' | |
| # R -e 'renv::restore()' | |
| # R -e 'remotes::install_github("paezha/geog4ga3")' | |
| # | |
| # - name: Build site | |
| # run: Rscript -e 'bookdown::render_book("index.Rmd", quiet = TRUE)' | |
| # - uses: actions/upload-artifact@v1 | |
| # with: | |
| # name: _book | |
| # path: _book/ | |
| # | |
| # | |
| # | |
| # # Need to first create an empty gh-pages branch | |
| # # see https://pkgdown.r-lib.org/reference/deploy_site_github.html | |
| # # and also add secrets for a GH_PAT and EMAIL to the repository | |
| # # gh-action from Cecilapp/GitHub-Pages-deploy | |
| # checkout-and-deploy: | |
| # runs-on: ubuntu-latest | |
| # needs: bookdown | |
| # steps: | |
| # - name: Checkout | |
| # uses: actions/checkout@master | |
| # - name: Download artifact | |
| # uses: actions/download-artifact@v1.0.0 | |
| # with: | |
| # # Artifact name | |
| # name: _book # optional | |
| # # Destination path | |
| # path: _book # optional | |
| # - name: Deploy to GitHub Pages | |
| # uses: Cecilapp/GitHub-Pages-deploy@master | |
| # env: | |
| # GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| # with: | |
| # email: paezha@gmail.com | |
| # jekyll: no | |
| # build_dir: _book # https://github.com/settings/tokens | |
| # | |
| # #- name: Install npm | |
| # # uses: actions/setup-node@v1 | |
| # | |
| # #- name: Deploy to Netlify | |
| # # NETLIFY_AUTH_TOKEN and NETLIFY_SITE_ID added in the repo's secrets | |
| # # env: | |
| # # NETLIFY_AUTH_TOKEN: ${{ secrets.NETLIFY_AUTH_TOKEN }} | |
| # # NETLIFY_SITE_ID: ${{ secrets.NETLIFY_SITE_ID }} | |
| # # run: | | |
| # # npm install netlify-cli -g | |
| # # netlify deploy --prod --dir _book |