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pascalbartschi/README.md

Hello, I'm Pascal! 👋

✏️ Pursuing a MSc in Computational Biology and Bioinformatics at ETH.

🔬 Research Student at the department for Evolutionary Biology and Environmental Studies in the predictive ecology group

🎓 Bachelor of Science in Biology (Major) and Computational Science (Minor)

🌱 Interested in learning and applying cutting-edge concepts of Systems Biology on todays challenges to contribute towards resolving the complexity of life.

📟 Mainly developing projects in Python and R.

🔧 My Skills:

  • Machine Learning: scikit-learn
  • Data analysis and visualization: Pandas, NumPy, Matplotlib, ggplot2, tidyverse
  • Bioinformatics tools: Biopython, BLAST, NCBI databases, BioconductoR
  • Statistical analysis: RStudio, scipy, statsmodels
  • Mathematical modeling: ODEs/PDEs, stochastic modeling
  • Version control: Git, GitHub
  • Typesetting: LaTeX

📫 Always open to collaboration or discussion related to computaional biology, bioinformatics, or any related topic. Please, contact me on LinkedIn or mail me your ideas.

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  1. DataScience-Portfolio DataScience-Portfolio Public

    My portfolio of algorithms I used to analysize various shapes and forms of data with statistical and machine learning tools.

    Jupyter Notebook 1

  2. tipping-point-symmetry tipping-point-symmetry Public

    Experiments performed with symmetric ecosystem model displaying hysteresis, as well as data storage and analysis.

    HTML

  3. ABM_classroom_infection ABM_classroom_infection Public

    This semester project suggests an approach, based on Agent-Based-Modelling, to optimize classroom size relative to their cost to keep the infection rate low in universities.

    R 1

  4. cfDNA-ML-analysis cfDNA-ML-analysis Public

    Using machine learning to learn from whole genome cell-free DNA data about presence, type and size of tumors..

    Jupyter Notebook

  5. simulations-natural-sciences simulations-natural-sciences Public

    A collection of deterministic simulations tackling different problems of the natural sciences.

    Python

  6. microxanox microxanox Public

    Forked from UZH-PEG/microxanox

    my up-to-date work is on the branch `symmetry_pascal`

    HTML