#10660 fix:cancelling revision file deletes original

classes/migration/SubmissionFilesMigration.inc.php

@@ -60,7 +60,7 @@ public function up() {
 			$table->bigInteger('submission_file_id')->unsigned();
 			$table->bigInteger('file_id')->unsigned();
 			$table->foreign('submission_file_id')->references('submission_file_id')->on('submission_files');
-			$table->foreign('file_id')->references('file_id')->on('files');
+			$table->foreign('file_id')->references('file_id')->on('files')->onDelete('cascade')->onUpdate('cascade');
 		});
 	}
 

classes/migration/upgrade/I8933_FixSubmissionFileRevisionsFileIdForeignKeyConstraint.inc.php

@@ -0,0 +1,40 @@
+<?php
+/**
+ * @file classes/migration/upgrade/I8933_FixSubmissionFileRevisionsFileIdForeignKeyConstraint.inc.php
+ *
+ * Copyright (c) 2024 Simon Fraser University
+ * Copyright (c) 2024 John Willinsky
+ * Distributed under the GNU GPL v3. For full terms see the file docs/COPYING.
+ *
+ * @class I8933_FixSubmissionFileRevisionsFileIdForeignKeyConstraint
+ * @brief Cascade delete and update for `fileId` in submission_file_revisions table.
+ */
+
+use Illuminate\Database\Capsule\Manager as Capsule;
+use Illuminate\Database\Migrations\Migration;
+use Illuminate\Database\Schema\Blueprint;
+
+class I8933_FixSubmissionFileRevisionsFileIdForeignKeyConstraint extends Migration
+{
+	/**
+	 * Run the migration.
+	 */
+	public function up()
+	{
+		Capsule::schema()->table('submission_file_revisions', function (Blueprint $table) {
+			$table->dropForeign(['file_id']);
+			$table->foreign('file_id')->references('file_id')->on('files')->onDelete('cascade')->onUpdate('cascade');
+		});
+	}
+
+	/**
+	 * Reverse the migration.
+	 */
+	public function down()
+	{
+		Capsule::schema()->table('submission_file_revisions', function (Blueprint $table) {
+			$table->dropForeign(['file_id']);
+			$table->foreign('file_id')->references('file_id')->on('files');
+		});
+	}
+}

controllers/api/file/PKPManageFileApiHandler.inc.php

@@ -26,7 +26,7 @@ function __construct() {
 		parent::__construct();
 		$this->addRoleAssignment(
 			array(ROLE_ID_MANAGER, ROLE_ID_SUB_EDITOR, ROLE_ID_ASSISTANT, ROLE_ID_REVIEWER, ROLE_ID_AUTHOR),
-			array('deleteFile', 'editMetadata', 'editMetadataTab', 'saveMetadata')
+			array('deleteFile', 'editMetadata', 'editMetadataTab', 'saveMetadata', 'cancelFileUpload')
 		);
 		// Load submission-specific translations
 		AppLocale::requireComponents(LOCALE_COMPONENT_PKP_SUBMISSION);
@@ -170,6 +170,109 @@ protected function getUpdateNotifications() {
 		return array(NOTIFICATION_TYPE_PENDING_EXTERNAL_REVISIONS);
 	}
 
+	/**
+	 * Restore original file when cancelling the upload wizard
+	 */
+	public function cancelFileUpload(array $args, Request $request): JSONMessage
+	{
+		if (!$request->checkCSRF()) {
+			return new JSONMessage(false);
+		}
+
+		$submissionFile = $this->getAuthorizedContextObject(ASSOC_TYPE_SUBMISSION_FILE); /**@var SubmissionFile $submissionFile */
+		$originalFile = $request->getUserVar('originalFile') ? (array)$request->getUserVar('originalFile') : null;
+		$revisedFileId = $request->getUserVar('fileId') ? (int)$request->getUserVar('fileId') : null;
+
+		$submissionFileDao = DAORegistry::getDAO('SubmissionFileDAO'); /* @var $submissionFileDao SubmissionFileDAO */
+
+		// Get revisions and check file IDs
+		$revisions = $submissionFileDao->getRevisions($submissionFile->getId());
+		$revisionIds = [];
+		foreach ($revisions as $revision) {
+			$revisionIds[] = $revision->fileId;
+		}
+
+		if (!$revisedFileId || !in_array($revisedFileId, $revisionIds)) {
+			return new JSONMessage(false);
+		}
+
+		if (!empty($originalFile)) {
+			if (!isset($originalFile['fileId']) || !in_array($originalFile['fileId'], $revisionIds)) {
+				return new JSONMessage(false);
+			}
+
+			$originalFileId = (int)$originalFile['fileId'];
+
+			// Get the file name and uploader user ID
+			$originalUserId = $originalFile['uploaderUserId'] ? (int)$originalFile['uploaderUserId'] : null;
+			$originalFileName = $originalFile['name'] ? (array)$originalFile['name'] : null;
+			if (!$originalUserId || !$originalFileName) {
+				return new JSONMessage(false);
+			}
+
+			$userDao = DAORegistry::getDAO('UserDAO'); /* @var $userDao UserDAO */
+
+			$originalUser = $userDao->getById($originalUserId);
+			if (!$originalUser) {
+				return new JSONMessage(false);
+			}
+
+			$originalUsername = $originalUser->getUsername();
+			$matchedLogEntry = $this->findMatchedLogEntry($submissionFile, $originalFileId, $originalUsername, $originalFileName);
+			if (!$matchedLogEntry) {
+				return new JSONMessage(false);
+			}
+
+			// Restore original submission file
+			$matchedLogEntryParams = $matchedLogEntry->getParams();
+			$submissionFile->setData('fileId', $matchedLogEntryParams['fileId']);
+			$submissionFile->setData('name', $originalFileName);
+			$submissionFile->setData('uploaderUserId', $userDao->getByUsername($matchedLogEntryParams['username'])->getId());
+			$submissionFileDao->updateObject($submissionFile);
+		}
+
+		// Remove uploaded file
+		Services::get('file')->delete($revisedFileId);
+		$this->setupTemplate($request);
+		return DAO::getDataChangedEvent();
+	}
+
+	/**
+	 * Compare user supplied data when cancelling file upload with saved in the event log;
+	 * assuming we found the right entry if they match
+	 */
+	protected function findMatchedLogEntry(
+		SubmissionFile $submissionFile,
+		int            $originalFileId,
+		string         $originalUsername,
+		array          $originalFileName
+	): ?EventLogEntry
+	{
+		$submissionFileEventLogDao = DAORegistry::getDAO('SubmissionFileEventLogDAO'); /* @var $submissionFileEventLogDao SubmissionFileEventLogDAO */
+
+		$logEntries = $submissionFileEventLogDao->getBySubmissionFileId($submissionFile->getId());
+		$match = null;
+		foreach ($logEntries->toIterator() as $logEntry) {
+			$params = $logEntry->getParams();
+			$loggedUsername = $params['username'];
+			$loggedFileName = $params['originalFileName'];
+			$loggedFileId = $params['fileId'];
+			if (!$loggedUsername || !$loggedFileName || !$loggedFileId) {
+				continue;
+			}
+
+			if (
+				$loggedUsername === $originalUsername &&
+				in_array($loggedFileName, $originalFileName) &&
+				$loggedFileId === $originalFileId
+			) {
+				$match = $logEntry;
+				break;
+			}
+		}
+
+		return $match;
+	}
 }
 
 

controllers/wizard/fileUpload/FileUploadWizardHandler.inc.php

@@ -367,14 +367,20 @@ function uploadFile($args, $request) {
 			return new JSONMessage(true, $uploadForm->fetch($request));
 		}
 
+		$submissionFileId = $uploadForm->getRevisedFileId();
+		// Store the data of the submission file before it's replaced by the revised file
+		if ($submissionFileId) {
+			$submissionFileDao = DAORegistry::getDAO('SubmissionFileDAO'); /* @var $submissionFileDao SubmissionFileDAO */
+			$originalFile = $submissionFileDao->getById($submissionFileId);
+		}
+
 		$uploadedFile = $uploadForm->execute(); /* @var $uploadedFile SubmissionFile */
 		if (!is_a($uploadedFile, 'SubmissionFile')) {
 			return new JSONMessage(false, __('common.uploadFailed'));
 		}
 
 		// Retrieve file info to be used in a JSON response.
-		$uploadedFileInfo = $this->_getUploadedFileInfo($uploadedFile);
-		$reviewRound = $this->getReviewRound();
+		$uploadedFileInfo = $this->_getUploadedFileInfo($uploadedFile, $originalFile ?? null);
 
 		// Advance to the next step (i.e. meta-data editing).
 		return new JSONMessage(true, '', '0', $uploadedFileInfo);
@@ -398,7 +404,7 @@ function editMetadata($args, $request) {
 		import('lib.pkp.controllers.wizard.fileUpload.form.SubmissionFilesMetadataForm');
 		$form = new SubmissionFilesMetadataForm($submissionFile, $this->getStageId(), $this->getReviewRound());
 		$form->initData();
-		
+
 		return new JSONMessage(true, $form->fetch($request));
 	}
 
@@ -462,14 +468,24 @@ function _onlyNumbersDiffer($a, $b) {
 	 * @param SubmissionFile $uploadedFile
 	 * @return array
 	 */
-	function _getUploadedFileInfo($uploadedFile) {
-		return array(
+	function _getUploadedFileInfo($uploadedFile, $originalFile = null) {
+		$uploadedFile = array(
 			'uploadedFile' => array(
 				'id' => $uploadedFile->getId(),
 				'fileId' => $uploadedFile->getData('fileId'),
 				'name' => $uploadedFile->getLocalizedData('name'),
 				'genreId' => $uploadedFile->getGenreId(),
 			)
 		);
+
+		if ($originalFile) {
+			$uploadedFile['uploadedFile']['originalFile'] = [
+				'fileId' => $originalFile->getData('fileId'),
+				'name' => $originalFile->getData('name'),
+				'uploaderUserId' => $originalFile->getData('uploaderUserId'),
+			];
+		}
+
+		return $uploadedFile;
 	}
 }

js/controllers/wizard/fileUpload/FileUploadWizardHandler.js

@@ -39,6 +39,7 @@
 		this.deleteUrl_ = options.deleteUrl;
 		this.metadataUrl_ = options.metadataUrl;
 		this.finishUrl_ = options.finishUrl;
+		this.cancelUrl_ = options.cancelUrl;
 
 		// Bind events of the nested upload forms.
 		this.bind('fileUploaded', this.handleFileUploaded);
@@ -65,7 +66,7 @@
 
 
 	/**
-	 * The URL to be called when a cancel event occurs.
+	 * The URL to be called when a delete event occurs.
 	 * @private
 	 * @type {string}
 	 */
@@ -90,7 +91,14 @@
 	$.pkp.controllers.wizard.fileUpload.FileUploadWizardHandler.
 			prototype.finishUrl_ = '';
 
-
+	/**
+	 * The URL to be called when a cancel event occurs.
+	 * @private
+	 * @type {string}
+	 */
+	$.pkp.controllers.wizard.fileUpload.FileUploadWizardHandler.
+		prototype.cancelUrl_ = '';
+
 	/**
 	 * Information about the uploaded file (once there is one).
 	 * @private
@@ -100,6 +108,14 @@
 			prototype.uploadedFile_ = null;
 
 
+	/**
+	* Information about the file being revised.
+	* @private
+	* @type {{fileId: number, name: string, uploaderUserId: number}}
+	*/
+	$.pkp.controllers.wizard.fileUpload.FileUploadWizardHandler.
+		prototype.originalFile_ = null;
+
 	//
 	// Public methods
 	//
@@ -243,7 +259,8 @@
 				this.uploadedFile_.csrfToken = this.csrfToken_;
 				// Authorization policy expects to find the submissionFileId para
 				this.uploadedFile_.submissionFileId = this.uploadedFile_.id;
-				$.post(this.deleteUrl_, this.uploadedFile_,
+				this.uploadedFile_.originalFile = this.originalFile_;
+				$.post(this.cancelUrl_, this.uploadedFile_,
 						$.pkp.classes.Helper.curry(this.wizardCancelSuccess, this,
 								wizardElement, event), 'json');
 
@@ -297,9 +314,15 @@
 	 */
 	$.pkp.controllers.wizard.fileUpload.FileUploadWizardHandler.
 			prototype.handleFileUploaded = function(callingForm, event, uploadedFile) {
+				// Keep the original file data to restore if the wizard is canceled
+				if (this.originalFile_ === null) {
+					this.originalFile_ = uploadedFile.originalFile;
+				}
+
+				delete uploadedFile.originalFile;
 
-		// Save the uploaded file information.
-		this.uploadedFile_ = uploadedFile;
+				// Save the uploaded file information.
+				this.uploadedFile_ = uploadedFile;
 	};
 
 
@@ -347,11 +370,10 @@
 	 */
 	$.pkp.controllers.wizard.fileUpload.FileUploadWizardHandler.
 			prototype.startWizard = function() {
+				// Reset the uploaded and original file.
+				this.uploadedFile_ = this.originalFile_ = null;
 
-		// Reset the uploaded file.
-		this.uploadedFile_ = null;
-
-		this.parent('startWizard');
+				this.parent('startWizard');
 	};
 
 

templates/controllers/wizard/fileUpload/fileUploadWizard.tpl

@@ -26,7 +26,8 @@
 				finishButtonText: {translate|json_encode key="common.complete"},
 				deleteUrl: {url|json_encode component="api.file.ManageFileApiHandler" op="deleteFile" submissionId=$submissionId stageId=$stageId fileStage=$fileStage suppressNotification=true escape=false},
 				metadataUrl: {url|json_encode op="editMetadata" submissionId=$submissionId stageId=$stageId reviewRoundId=$reviewRoundId fileStage=$fileStage assocType=$assocType assocId=$assocId queryId=$queryId escape=false},
-				finishUrl: {url|json_encode op="finishFileSubmission" submissionId=$submissionId stageId=$stageId reviewRoundId=$reviewRoundId fileStage=$fileStage assocType=$assocType assocId=$assocId queryId=$queryId escape=false}
+				finishUrl: {url|json_encode op="finishFileSubmission" submissionId=$submissionId stageId=$stageId reviewRoundId=$reviewRoundId fileStage=$fileStage assocType=$assocType assocId=$assocId queryId=$queryId escape=false},
+				cancelUrl: {url|json_encode component="api.file.ManageFileApiHandler" op="cancelFileUpload" submissionId=$submissionId stageId=$stageId fileStage=$fileStage escape=false}
 			{rdelim}
 		);
 	{rdelim});