test-datasets

This holds test datasets specific for pipelines developed at QBiC

• annotated.vcf.gz: VEP annotated VCF file for filtering test of qbic-pipelines/vcftocounts
• variantconsensus: Holds VEP annotated VCF files for testing qbic-pipelines/variantconsensus
  • tumor_5_vs_normal_5.muse_VEP.ann.vcf.gz: SNPs & INDELs called with MuSE
  • tumor_5_vs_normal_5.muse_VEP.ann.vcf.gz.tbi: Corresponding Index
  • tumor_5_vs_normal_5.strelka.somatic_indels_VEP.ann.vcf.gz: INDELs called with Strelka
  • tumor_5_vs_normal_5.strelka.somatic_indels_VEP.ann.vcf.gz.tbi: Corresponding Index
  • tumor_5_vs_normal_5.strelka.somatic_snvs_VEP.ann.vcf.gz: SNPs called with Strelka
  • tumor_5_vs_normal_5.strelka.somatic_snvs_VEP.ann.vcf.gz.tbi: Corresponding Index