Skip to content
@qupath

QuPath

Open source software for bioimage analysis
README.md

Pinned Loading

  1. qupath qupath Public

    QuPath - Open-source bioimage analysis for research

    Java 1.1k 298

  2. qupath-docs qupath-docs Public

    QuPath documentation

    Python 19 24

  3. qupath-extension-stardist qupath-extension-stardist Public

    QuPath extension to run StarDist nucleus detection

    Java 39 7

  4. qupath-extension-djl qupath-extension-djl Public

    A QuPath extension for working with Deep Java Library (https://djl.ai)

    Java 6 6

  5. qupath-extension-omero-web qupath-extension-omero-web Public

    QuPath extension to work with images through OMERO's web API

    Java 9 11

  6. qupath-extension-bioimageio qupath-extension-bioimageio Public

    A QuPath extension for working with the Bioimage Model Zoo (https://bioimage.io)

    Java 4 4

Repositories

Showing 10 of 45 repositories
  • qupath Public

    QuPath - Open-source bioimage analysis for research

    qupath/qupath’s past year of commit activity
    Java 1,149 GPL-3.0 298 38 4 Updated May 3, 2025
  • qupath-catalog Public

    The catalog containing QuPath extensions developed by the QuPath team

    qupath/qupath-catalog’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated May 1, 2025
  • qupath.github.io Public

    GitHub pages site

    qupath/qupath.github.io’s past year of commit activity
    SCSS 2 MIT 5 0 0 Updated May 1, 2025
  • qupath-gradle-plugin Public

    Gradle plugins to help create QuPath extensions

    qupath/qupath-gradle-plugin’s past year of commit activity
    Java 0 Apache-2.0 1 0 0 Updated May 1, 2025
  • qupath-extension-instanseg Public

    The official QuPath extension for InstanSeg

    qupath/qupath-extension-instanseg’s past year of commit activity
    Java 16 Apache-2.0 6 5 0 Updated Apr 29, 2025
  • qupath-docs Public

    QuPath documentation

    qupath/qupath-docs’s past year of commit activity
    Python 19 24 7 0 Updated Apr 24, 2025
  • extension-catalog-model Public
    qupath/extension-catalog-model’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Apr 24, 2025
  • extension-manager Public

    A manager for catalogs and extensions.

    qupath/extension-manager’s past year of commit activity
    Java 0 Apache-2.0 2 0 0 Updated Apr 24, 2025
  • qupath-extension-omero Public

    QuPath extension to work with images through OMERO's APIs

    qupath/qupath-extension-omero’s past year of commit activity
    Java 4 Apache-2.0 1 1 0 Updated Apr 21, 2025
  • qupath-extension-djl Public

    A QuPath extension for working with Deep Java Library (https://djl.ai)

    qupath/qupath-extension-djl’s past year of commit activity
    Java 6 Apache-2.0 6 2 0 Updated Apr 15, 2025
View all repositories

Top languages

Loading…

Most used topics

Loading…