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Add link to generate_cm_library script in Readme
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AntonPetrov authored Feb 3, 2021
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Expand Up @@ -199,11 +199,11 @@ In addition, all models are listed in the file [models.json](./data/models.json)
If you would like to submit a new template or replace an existing one, please [submit an issue](https://github.com/RNAcentral/R2DT/issues/new) including:
- Description of the new template and any relevant background information
- A FASTA file with a reference sequence and secondary structure - see [example](./data/rfam/RF00002/RF00002-traveler.fasta)
- A [Traveler XML file](https://github.com/davidhoksza/traveler#traveler-intermediate-format) - see [example](./data/rfam/RF00002/traveler-template.xml)
- Description of the new template and any relevant background information
It is also possible to generate a new template using a special version of the XRNA software, [XRNA-GT](https://github.com/LDWLab/XRNA-GT).
One can create a new template locally using the [generate_cm_library.py](./utils/generate_cm_library.py) script with the FASTA and XML files described above. It is also possible to generate a new template using a special version of the XRNA software, [XRNA-GT](https://github.com/LDWLab/XRNA-GT).
:warning: GitHub currently does not support attaching files with `.fasta` or `.bpseq` extensions so please attach the files as `.txt`.
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