Blacklist Rfam tmRNA models

Use specialised tmRNA library instead
r2dt-bio · Feb 2, 2025 · fa0ecdb · fa0ecdb
1 parent 149526d
commit fa0ecdb
Showing 1 changed file with 5 additions and 0 deletions.
diff --git a/utils/rfam.py b/utils/rfam.py
@@ -53,6 +53,11 @@
     "RF00373",  # Archaeal RNase P
     "RF00061",  # HCV IRES
     "RF02357",  # RNAse P Type T
+    "RF00023",  # tmRNA
+    "RF01849",  # Alphaproteobacteria transfer-messenger RNA
+    "RF01850",  # Betaproteobacteria transfer-messenger RNA
+    "RF01851",  # Cyanobacteria transfer-messenger RNA
+    "RF02544",  # Mitochondrion-encoded tmRNA
 ]
 
 PREFER_RNARTIST_LIST = Path(config.RFAM_DATA) / "prefer_rnartist.txt"