make cchalf use unweighted pearson #181
Merged
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Following a discussion with Kay Diederichs on the rs-station forum, careless should use the unweighted Pearson correlation coefficient for CChalf. I'm making this the default with an option to use a weighted variant. All CC stats CLI programs now will take 'weighted', 'pearson', or 'spearman' for the
--method
flag. The defaults are set as follows