Here, we publish all scripts to reproduce the analyses in the manuscript Sciphy: A Bayesian phylogenetic framework using sequential genetic lineage tracing data available as a preprint on bioRvix
Refer to the README file within each figure directory for instructions on running the code to reproduce that respective figure.
If you experience difficulties re-running the analyses, either post an issue here if it concerns the scripts, or post an issue on the SciPhy github repository if it concerns the SciPhy package.