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Compute local alleles during encode #292

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Run time

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Job	Run time
Lint	7s
Packaging	29s
Test (macos-13, 3.9)	11m 14s
Test Zarr versions (==2.18.3)	4m 35s
Test (macos-14, 3.11)	4m 47s
Test numpy versions (==1.26)	54s
Test Zarr versions (>=3)	6m 21s
Test numpy versions (>=2)	57s
Test (ubuntu-latest, 3.9)	6m 26s
Test (ubuntu-latest, 3.10)	5m 12s
Test (ubuntu-latest, 3.11)	4m 35s
Test (ubuntu-latest, 3.12)	6m 8s
	51m 45s