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fix: change tabs to spaces, fix syntax
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dlaehnemann committed Apr 17, 2024
1 parent d809f3b commit 6edcdad
Showing 1 changed file with 7 additions and 7 deletions.
14 changes: 7 additions & 7 deletions workflow/rules/circle_map.smk
Original file line number Diff line number Diff line change
Expand Up @@ -65,12 +65,12 @@ rule clean_circle_map_realign_output:
conda:
"../envs/pandas.yaml"
params:
min_circle_score=config["circle_filtering"]["min_circle_score"],
min_split_reads=config["circle_filtering"]["min_split_reads"],
min_discordant_read_pairs=config["circle_filtering"]["min_discordant_read_pairs"],
max_uncovered_fraction=config["circle_filtering"]["max_uncovered_fraction"],
min_mean_coverage=config["circle_filtering"]["min_mean_coverage"],
min_circle_length=config["circle_filtering"]["min_circle_length"],
max_circle_length=config["circle_filtering"]["max_circle_length"],
min_circle_score=config["circle_filtering"]["min_circle_score"],
min_split_reads=config["circle_filtering"]["min_split_reads"],
min_discordant_read_pairs=config["circle_filtering"]["min_discordant_read_pairs"],
max_uncovered_fraction=config["circle_filtering"]["max_uncovered_fraction"],
min_mean_coverage=config["circle_filtering"]["min_mean_coverage"],
min_circle_length=config["circle_filtering"]["min_circle_length"],
max_circle_length=config["circle_filtering"]["max_circle_length"],
script:
"../scripts/clean_circle_map_realign_output.py"

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