feat: add mem_mb resource annotation to bwa_mem

snakemake-workflows · Feb 29, 2024 · 8e89e6a · 8e89e6a
1 parent df330ac
commit 8e89e6a
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/workflow/rules/mapping.smk b/workflow/rules/mapping.smk
@@ -12,6 +12,8 @@ rule bwa_mem:
         sort_order="coordinate",  # Can be 'queryname' or 'coordinate'.
         sort_extra="",  # Extra args for samtools/picard.
     threads: 8
+    resources:
+        mem_mb=lambda wc, threads: threads * 4000
     wrapper:
         "v1.21.2/bio/bwa/mem"